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Rethinking Visual Attribution for Chest X-ray Reasoning in Large Vision Language Models
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Builds MedGround-Bench, a causally filtered CXR-VQA attribution benchmark, shows 11 attribution methods fail on it, and proposes MedFocus, a concept-based causal attribution method using unbalanced optimal transport and concept intervention.
Problem
Whether visual attribution explanations of large vision language models on chest X-ray questions reflect the visual evidence actually driving predictions, given that ground-truth annotations of internal model reasoning are unavailable.
Approach
Uses counterfactual editing (RadEdit foreground/background edits) to keep only expert-annotated regions that causally drive LVLM answers as verified ground truth, and attributes predictions by intervening on UOT-localized anatomical concepts and measuring token log-probability drops.
Key results
- MedFocus reaches 54.24% IoU on ImaGenome direct mode, versus 39.24% for the best baseline (Gradient-weighted Attention).
- On MedGround-Bench-Reason, MedFocus attains 52.95% IoU on ImaGenome while GradCAM++ drops from 30.54% to 23.70%.
- Ablation: UOT + MedSAM with bounding-box zero masking gives 37.82% IoU, above end-to-end SAM3 (30.89%) and MedSAM3 (33.52%).
Surprising findings
- Reasoning mode shows substantially lower failure rates than direct-answer mode for all models, often approaching zero on the final grounded group.
- Gradient-weighted Attention achieves near-perfect recall (99.90% on ImaGenome) but very low precision, indicating overly broad maps.
Limitations
- Evaluation limited to chest X-ray and binary yes/no VQA on correctly answered samples.
- Concept vocabulary limited to 11 ImaGenome anatomical regions, so findings like small nodules are not covered.
- Benchmark relies on RadEdit counterfactuals, which may introduce editing artifacts.
Experimental setup
Datasets: ImaGenome VinDR-CXR PadChest-GR MIMIC-CXR-JPG
Benchmarks: MedGround-Bench-Direct MedGround-Bench-Reason
Metrics: IoU F1 precision recall
Baselines: Attention Head Attention Rollout LRP Gradient-weighted Attention GradCAM GradCAM++ Integrated Gradients Prompting Prompting + MedSAM Occlusion RISE
Builds on: Sinkhorn algorithm MedSAM RadEdit GradCAM Occlusion
Closest papers by meaning
- CXReasonBench: A Benchmark for Evaluating Structured Diagnostic Reasoning in Chest X-rays (NeurIPS 2025 · similarity 0.90)
- BenchX: A Unified Benchmark Framework for Medical Vision-Language Pretraining on Chest X-Rays (NeurIPS 2024 · similarity 0.89)
- AOR: Anatomical Ontology-Guided Reasoning for Medical Large Multimodal Model in Chest X-Ray Interpretation (NeurIPS 2025 · similarity 0.88)
- CRAFT: Causal Responsibility and Failure Tracing in Medical Vision Language Models (NeurIPS 2026 · similarity 0.88)
- Medical thinking with multiple images (ICLR 2026 · similarity 0.87)
- M3CoTBench: Benchmark Chain-of-Thought of MLLMs in Medical Image Understanding (ICLR 2026 · similarity 0.87)
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