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Transfusion: Understanding Transfer Learning for Medical Imaging

NeurIPS 2019 · Label-efficient and robust learning › Recognition and long-tail · approach: Dense features and foundation priors · 637 citations (OpenAlex)

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Measured effects reported in the paper

What was changedWhereMeasuredEffect
Initialize Resnet-50 with ImageNet pretrained weights instead of random weightsResnet-50 · RetinaAUC-ROC: $96.4\% \pm 0.05$ -> $96.7\% \pm 0.04$No clear effect
Initialize Inception-v3 with ImageNet pretrained weights instead of random weightsInception-v3 · RetinaAUC-ROC: $96.6\% \pm 0.13$ -> $96.7\% \pm 0.05$No clear effect
Use ImageNet transfer instead of random initializationResnet-50 · CheXpert AtelectasisAUC: 79.52$\pm$0.31 -> 79.76$\pm$0.47Helped
Use ImageNet transfer instead of random initializationResnet-50 · CheXpert CardiomegalyAUC: 75.23$\pm$0.35 -> 74.93$\pm$1.41Hurt
Use ImageNet transfer instead of random initializationResnet-50 · CheXpert ConsolidationAUC: 85.49$\pm$1.32 -> 84.42$\pm$0.65Hurt
Use ImageNet transfer instead of random initializationResnet-50 · CheXpert EdemaAUC: 88.34$\pm$1.17 -> 88.89$\pm$1.66Helped
Use ImageNet transfer instead of random initializationResnet-50 · CheXpert Pleural EffusionAUC: 88.70$\pm$0.13 -> 88.07$\pm$1.23Hurt
Use ImageNet pretrained weights rather than random initializationResnet50 · Retina, 5k datapointsAUC-ROC: $92.2 \%$ -> $94.6 \%$Helped
Use ImageNet pretrained weights rather than random initializationCBR-LargeT · Retina, 5k datapointsAUC-ROC: $93.6 \%$ -> $93.9 \%$No clear effect
Use ImageNet pretrained weights rather than random initializationCBR-LargeW · Retina, 5k datapointsAUC-ROC: $93.6 \%$ -> $93.7 \%$No clear effect
Preserve per-layer pretrained weight mean and variance while destroying pretrained features (ablation)Mean Var initialization · Retina and CheXpertconvergence speedHelped
Reuse pretrained weights in the lowest layers, especially conv1 (ablation)Resnet-50 weight transfusion · Retinaconvergence speedHelped

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