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Uni-Hema: Unified Model for Digital Hematopathology
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Proposes Uni-Hema, a unified vision-language model that jointly handles detection, classification, segmentation, morphology prediction, VQA and masked language modeling across 46 hematology datasets, using a Hema-Former fusion module.
Problem
Digital hematopathology tasks (detection, classification, segmentation, morphology reasoning) across leukemia, malaria, anemia and sickle cell disease are handled by separate single-task, single-dataset models, which limits scalability and clinical applicability.
Approach
A multi-stage trained unified architecture (ResNet-50 + DINO-DETR-style encoder/decoder + T5 text encoder/decoder) with a Hema-Former module (cross-modal fusion, text-guided refinement, single-cell feature extractor, query-guided mask former) that routes visual and textual features to task-specific heads, with semi-synthetic VQA and MLM datasets generated from morphology annotations.
Key results
- Detection mean mAP50 of 61.1 for Uni-Hema vs 60.4 for DINO and 59.4 for YOLO; best on 4 leukemia FoV datasets (e.g., H_40x_C2 43.6 vs 40.6 AttriDet).
- Segmentation mean Dice 91.7 for Uni-Hema vs 93.7 for TransNetR (TransNetR remains best on mean), while Uni-Hema is 99.9 on Elsafty.
- Unseen-dataset single-cell classification mean F1 90.8 vs 89.9 for DinoBloom-S; VQA BLEU-4 56.4 and V-MLM BLEU-4 79.8.
Surprising findings
- Uni-Hema trails single-task baselines on several detection datasets such as Sickle Cell (67.0 vs 73.6 DINO) and Parasites (36.2 vs 46.1 YOLO), which the authors attribute to limited training samples.
- The segmentation mean Dice (91.7) is below TransNetR (93.7) on the reported datasets despite the unified training.
Limitations
- Trails specialized single-task models on some detection datasets with few samples (sickle cell, parasites).
- Segmentation uses a simple upsampler due to resource constraints, which may reduce edge sharpness.
- VQA and MLM datasets are semi-synthetic, generated by BioMistral and Gemini 1.5, and not intended for medical use.
Experimental setup
Datasets: H_40x_C2 H_100x_C2 L_40x_C2 L_100x_C2 H_1000x L_1000x H_400x L_400x Sickle Cell Parasites BCCD TXL
Benchmarks: H_40x_C2 H_100x_C2 L_40x_C2 L_100x_C2 H_1000x L_1000x H_400x L_400x Sickle Cell Parasites BCCD TXL
Metrics: mAP50 F1 Dice score BLEU-4 F1-macro
Baselines: DINO YOLO U-Net NanoNet TransNetR DinoBloom-S DINOv2-S DINOv3-S ResNet-50 AttriDet
Builds on: DINO-DETR Mask DINO T5 ResNet
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