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MLLM-HWSI: A Multimodal Large Language Model for Hierarchical Whole Slide Image Understanding

CVPR 2026 · Vision-language and multimodal › Multimodal LLMs · approach: Benchmarks and analysis of MLLMs · 0 citations (OpenAlex)

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Proposes MLLM-HWSI, a hierarchical whole-slide-image MLLM that aligns cell, patch, region and WSI features with pathology language via hierarchical contrastive and cross-scale consistency losses, then instruction-tunes a Qwen2.5-7B LLM for VQA, report and caption generation.

Problem

Existing computational pathology MLLMs compress an entire WSI into a single global embedding, losing fine-grained spatial semantics and failing to mirror how pathologists integrate evidence across magnifications.

Approach

Decompose each WSI into four scales (cells as words, patches as phrases, regions as sentences, WSI as paragraph), encode each with scale-specific encoders and projectors, align each scale to pathology report text with a hierarchical contrastive loss plus a cross-scale consistency loss, and feed the multi-scale tokens to an LLM.

Key results

Limitations

Experimental setup

Datasets: WSI-Bench PANDA EBRAINS WSI-VQA SlideBench-VQA TCGA-Slide-Reports HistGen BRACS UBC-Ocean TCGA-OT IMP-CRC

Benchmarks: PANDA EBRAINS BRACS UBC-Ocean TCGA-OT IMP-CRC WSI-VQA SlideBench-VQA WSI-Bench HistGen TCGA-Slide-Reports SlideBench-Caption

Metrics: balanced accuracy weighted F1 accuracy BLEU ROUGE METEOR Recall@K top-1% accuracy

Baselines: SlideChat WSI-LLaVA TITAN Quilt-LLaVA PRISM HistGen CONCH GPT-4V

Builds on: LLaVA CONCH CellViT HIPT Qwen2.5

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