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OpenMedReason: Scientific Reasoning Supervision for Medical Vision–Language Models
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Introduces OpenMedReason, a ~450K medical VQA reasoning corpus with source-grounded traces from biomedical article figures, plus a capability-decomposed benchmark, and shows SFT→GRPO on Qwen2.5-VL-7B improves medical VQA.
Problem
Medical LVLMs need reasoning supervision grounded in visual evidence and clinical knowledge, but existing open resources either lack reasoning traces or rely on end-to-end LLM rollouts, and evaluation focuses on final-answer accuracy.
Approach
Derive reasoning traces from curated, human-authored biomedical figure captions and in-text context (Open-PMC) rather than purely synthetic LLM rollouts, structure them as modality→visual evidence→clinical interpretation→answer, and evaluate with a checklist-based trace score decomposed into perception, knowledge, and rationale axes.
Key results
- SFT+GRPO on OpenMedReason raises Qwen2.5-VL-7B average VQA accuracy from 53.10 to 60.04 across the reported VQA benchmarks (cumulative gain ~7 points), with 78.51 on OpenMedReason-Bench vs 47.11 for base.
- On OpenMedReason-Bench trace evaluation, the model reaches a Reasoning Trace Score of 77.8 vs 70.9 for gpt-5-mini and 37.4 for the Qwen2.5-VL-7B base.
- Classification averages rise from 43.12 (base) to 65.07, above Lingshu 7B (61.76) on the reported classification benchmarks.
Surprising findings
- Adding SFT on OpenMedReason traces without Open-PMC data gives in-distribution gains but the Open-PMC-derived subset is what drives the out-of-distribution improvement.
- Pass@10 gains on MedXpertQA and JAMA exceed Pass@1 gains, suggesting expanded reachable solution coverage.
Limitations
- Derived from published biomedical figures, inheriting literature biases such as over-representation of rare cases and uneven modality coverage.
- Benchmark scores and traces are not evidence of clinical safety or deployment readiness.
- LoRA training was used due to computational constraints, and the vision tower was frozen.
Experimental setup
Datasets: Open-PMC-18M SLAKE VQA-RAD PathVQA PMC-VQA MedXpertQA JAMA CC-MM HAM10000 EyePACS HyperKvasir BrainTumorMRI VinDr-CXR
Benchmarks: OpenMedReason-Bench SLAKE VQA-RAD PathVQA PMC-VQA MedXpertQA-MM JAMA CC-MM HAM10000 EyePACS HyperKvasir BrainTumorMRI VinDr-CXR
Metrics: accuracy presence correctness reasoning trace score pass@1 pass@10 pairwise win rate
Baselines: Lingshu 7B OctoMed 7B MedGemma 27B MedGemma 1.5 4B QoQ-Med-VL 7B MedVL-Thinker 7B Qwen2.5-VL-7B gpt-5-mini claude-haiku-4.5 gemini-3-flash
Builds on: GRPO Open-PMC-18M Qwen2.5-VL
Closest papers by meaning
- OctoMed: Data Recipes for State-of-the-Art Multimodal Medical Reasoning (CVPR 2026 · similarity 0.91)
- Med-CMR: A Fine-Grained Benchmark Integrating Visual Evidence and Clinical Logic for Medical Complex Multimodal Reasoning (CVPR 2026 · similarity 0.91)
- Medical thinking with multiple images (ICLR 2026 · similarity 0.91)
- OmniMedVQA: A New Large-Scale Comprehensive Evaluation Benchmark for Medical LVLM (CVPR 2024 · similarity 0.90)
- Visual and Domain Knowledge for Professional-level Graph-of-Thought Medical Reasoning (ICML 2025 · similarity 0.90)
- MedReasoner: Reinforcement Learning Drives Reasoning Grounding from Clinical Thought to Pixel-Level Precision (AAAI 2026 · similarity 0.90)
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