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CosmoBench: A Multiscale, Multiview, Multitask Cosmology Benchmark for Geometric Deep Learning

NeurIPS 2025 · Point clouds › Point cloud classification · approach: Local feature aggregation networks · 0 citations (OpenAlex)

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Introduces CosmoBench, a multiscale, multiview, multitask benchmark of point clouds and merger trees from cosmological simulations, with baselines (2PCF-MLP, linear least squares, GNNs, linear theory, DeepSets, kNN, EPS) showing simple least-squares models often match or beat GNNs.

Problem

Cosmological simulations produce point clouds of halos/galaxies and directed merger trees, but there is no unified large-scale benchmark that formalizes cosmology tasks for geometric deep learning.

Approach

Curate three point-cloud suites (Quijote, CAMELS-SAM, CAMELS) and a merger-tree dataset (CS-Trees) into one benchmark with parameter regression, velocity prediction (including redshift-space variant), and merger-node classification/tree super-resolution tasks, and benchmark classical cosmology statistics against GNNs and simple symmetry-constrained linear models.

Key results

Measured effects reported in the paper

What was changedWhereMeasuredEffect
Use LLS pairwise-distance statistics instead of GNNPoint-cloud velocity prediction · QuijoteR² velocity: 0.4100 -> 0.4347Helped
Use GNN instead of LLSPoint-cloud velocity prediction · CAMELS-SAMR² velocity: 0.2107 -> 0.2865Helped
Use linear theory oracle instead of GNNPoint-cloud velocity prediction · CAMELSR² velocity: 0.2527 -> 0.2970*Helped
Modify the LLS baseline for redshift-space positionsVelocity prediction from redshift positions · CAMELS-SAMR² velocity: 0.1172 -> 0.2116Helped
Modify the LLS baseline for redshift-space positionsVelocity prediction from redshift positions · CAMELSR² velocity: 0.0801 -> 0.2185Helped
Remove edge-edge message passing (ablation)Point-cloud GNN · Quijote cosmology prediction, ΩmR²: 0.80 ± 0.004 -> 0.80 ± 0.004No clear effect
Use logarithmic rather than linear bins (25 bins) (ablation)2PCF cosmology predictor · Quijote, σ8R²: 0.74 ± 0.006 -> 0.84 ± 0.004Helped
Use 250 rather than 25 logarithmic bins (ablation)2PCF cosmology predictor · Quijote, ΩmR²: 0.84 ± 0.004 -> 0.83 ± 0.004No clear effect
Use a 4× larger maximum bin radius than the base range (ablation)2PCF cosmology predictor · Quijote, σ8R²: 0.83 ± 0.004 -> 0.84 ± 0.004Helped
Use a 4× smaller minimum bin radius than the base range (ablation)2PCF cosmology predictor · CAMELS-SAM, ΩmR²: 0.64 ± 0.03 -> 0.73 ± 0.03Helped
Use GNN rather than DeepSet to exploit merger-tree topologyMerger-tree cosmological parameter prediction · CS-Trees, Ωm (concentration-only features)R²: 0.68 ± 0.008 -> 0.84 ± 0.004Helped

Surprising findings

Limitations

Experimental setup

Datasets: Quijote CAMELS-SAM CAMELS CS-Trees

Benchmarks: CosmoBench

Metrics: R^2 accuracy bootstrap std

Baselines: 2PCF-MLP linear least squares (LLS) GNN linear theory oracle 1-nearest neighbor DeepSets k-nearest neighbor Extended Press-Schechter

Builds on: message passing neural network DeepSets Extended Press-Schechter

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