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Samba: Severity-aware Recurrent Modeling for Cross-domain Medical Image Grading

NeurIPS 2024 · Label-efficient and robust learning › Domain adaptation and generalization · approach: Cross-domain text and graph transfer · 5 citations (OpenAlex)

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Proposes Samba, a Mamba-based grading model that scans image patches recurrently and recalibrates features with EM-estimated GMM severity bases, for domain-generalized medical image grading.

Problem

Disease grading from medical images must generalize from a source domain to unseen target domains, where cross-domain style variation disrupts identification of the most severe lesion and within-/cross-level feature clustering.

Approach

Encode image patches as a sequence with bidirectional selective state space (Mamba) layers to propagate severity information, then apply an EM-based state recalibration that models patch features as a GMM with learnable severity bases (updated by moving average) to compact the feature space and reduce domain shift.

Key results

Measured effects reported in the paper

What was changedWhereMeasuredEffect
Use Samba rather than VMambaFatigue Fracture grading · Fatigue Fracture (Domain-1→Domain-2)ACC: 52.7 -> 76.2Helped
Use Samba rather than VMambaFatigue Fracture grading · Fatigue Fracture (Domain-1→Domain-2)AUC: 70.4 -> 81.5Helped
Use Samba rather than VMambaFatigue Fracture grading · Fatigue Fracture (Domain-1→Domain-2)F1: 28.7 -> 45.8Helped
Use Samba rather than the strongest listed baselineDR grading · APTOS, DeepDR, FGADR, IDRID, Messidor, and RLDRACC: APTOS 64.0 -> 65.9; DeepDR 61.0 -> 67.2; FGADR 8.7 -> 68.2; IDRID 70.0 -> 68.9; Messidor 69.1 -> 72.4; RLDR 44.3 -> 72.6Mixed
Use Samba rather than the strongest listed baselineDR grading · APTOS, DeepDR, FGADR, IDRID, Messidor, and RLDRF1: APTOS 36.8 -> 37.9; DeepDR 36.3 -> 40.7; FGADR 9.2 -> 40.5; IDRID 38.1 -> 41.7; Messidor 40.5 -> 41.8; RLDR 37.9 -> 42.6Helped
Add bidirectional state space modeling (BSSM) (ablation)VMamba on Fatigue Fracture grading · Fatigue Fracture (Domain-1→Domain-2)ACC: 52.7 -> 57.9; +5.2%Helped
Add bidirectional state space modeling (BSSM) (ablation)VMamba on Fatigue Fracture grading · Fatigue Fracture (Domain-1→Domain-2)AUC: 70.4 -> 72.1; 1.7%Helped
Add bidirectional state space modeling (BSSM) (ablation)VMamba on Fatigue Fracture grading · Fatigue Fracture (Domain-1→Domain-2)F1: 28.7 -> 33.6; 4.9%Helped
Add EM-based state recalibration (ESR) after BSSM (ablation)VMamba + BSSM on Fatigue Fracture grading · Fatigue Fracture (Domain-1→Domain-2)ACC: 57.9 -> 76.2; 18.3%Helped
Add EM-based state recalibration (ESR) after BSSM (ablation)VMamba + BSSM on Fatigue Fracture grading · Fatigue Fracture (Domain-1→Domain-2)AUC: 72.1 -> 81.5; 9.4%Helped
Add EM-based state recalibration (ESR) after BSSM (ablation)VMamba + BSSM on Fatigue Fracture grading · Fatigue Fracture (Domain-1→Domain-2)F1: 33.6 -> 45.8; 12.2%Helped
Vary the number of GMM components K (ablation)Samba on Breast Cancer grading · Breast Cancer (Domain-1×20→Domain-2×40)ACC: 58.6; 59.2; 60.4; 60.5; 60.4; 59.5Mixed

Surprising findings

Limitations

Experimental setup

Datasets: Cross-domain Fatigue Fracture Grading Benchmark Cross-domain Breast Cancer Grading Benchmark DeepDR Messidor IDRID APTOS FGADR RLDR DDR EyePACS CAMELYON17

Benchmarks: Fatigue Fracture Grading Benchmark Breast Cancer Grading Benchmark Diabetic Retinopathy Grading Benchmark CAMELYON17

Metrics: ACC AUC F1

Baselines: VMamba-ERM VMamba Vision Transformer LSTM UR-LSTM GDRNet DRGen MIL-ViT Swin-Transformer Mixup MixStyle GREEN

Builds on: Mamba VMamba Vision Mamba GDRNet Expectation-Maximization

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