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Reinforcement Learning for Tool-Calling Agents in Fast Healthcare Interoperability Resources (FHIR)
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Post-trains Qwen3-8B as a multi-turn CodeAct FHIR QA agent with GRPO and an LLM-judge reward on FHIR-AgentBench, raising answer correctness from about 20% to 77% and beating o4-mini (47%) and other closed baselines.
Problem
Answering clinical questions over FHIR resource graphs requires multi-hop traversal, filtering, and aggregation, and open-weight LLM agents underperform closed models on this realistic EHR tool-use task.
Approach
Frame FHIR question answering as sequential decision-making over a resource graph and apply execution-grounded RL (GRPO with an LLM-judge binary reward) to a multi-turn CodeAct agent with retrieval and Python tools, with dynamic sampling that filters zero-variance groups.
Key results
- Qwen3-8B + RL (GRPO + clip-higher + DAPO filter) reaches 76.7% ± 0.9 answer correctness on FHIR-AgentBench validation, versus 19.7% for vanilla Qwen3-8B and 46.9% for o4-mini.
- Judge agreement with a board-certified physician is 96.2% (precision 96.7%, recall 97.4%).
- Symmetric vs. asymmetric clipping give nearly identical results (64% vs. 62%), while adding DAPO dynamic sampling reaches 77% in fewer steps.
Surprising findings
- RL-trained agent learns to answer within a six-turn budget while vanilla Qwen3-8B uses a 12-turn budget, so accuracy rises while turns decrease.
- The agent first learns to return empty answers (cheapest reward) before improving on data-retrieval question types, with some negative transfer to the Empty category.
Limitations
- Retrieval tool fetches whole resource types and will not scale to large patient populations without query planning.
- Evaluation relies on an LLM judge with 96% agreement with one physician annotator; 77% accuracy remains far below clinical reliability.
- Failures concentrate on multi-hop reference traversal, e.g. MedicationRequest-Medication resolution, applied inconsistently.
Experimental setup
Datasets: FHIR-AgentBench MIMIC-IV FHIR demo (100 patients)
Benchmarks: FHIR-AgentBench
Metrics: answer correctness pass@5 per-turn score per-resource-type accuracy
Baselines: o4-mini Gemini 3 Flash GLM-5 Qwen3-4B Qwen3-8B Qwen3-14B Qwen3-32B
Builds on: GRPO CodeAct DAPO SkyRL FHIR-AgentBench
Closest papers by meaning
- MedChain: Bridging the Gap Between LLM Agents and Clinical Practice with Interactive Sequence (NeurIPS 2025 · similarity 0.87)
- MMedAgent-RL: Optimizing Multi-Agent Collaboration for Multimodal Medical Reasoning (ICLR 2026 · similarity 0.87)
- MedLA: A Logic-Driven Multi-Agent Framework for Complex Medical Reasoning with Large Language Models (AAAI 2026 · similarity 0.87)
- AGILE: A Novel Reinforcement Learning Framework of LLM Agents (NeurIPS 2024 · similarity 0.86)
- Doctor-R1: Mastering Clinical Inquiry with Experiential Agentic Reinforcement Learning (ICLR 2026 · similarity 0.86)
- MedExAgent: Training LLM Agents to Ask, Examine, and Diagnose in Noisy Clinical Environments (NeurIPS 2026 · similarity 0.86)
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