Research map / Detection and segmentation / Open-set and few-shot detection
"Why Is There a Tumor?": Tell Me the Reason, Show Me the Evidence
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Curates a 180K image-mask-rationale prostate MRI dataset from PI-RADS reports via GPT-4o and a PI-RADS decision tree, and trains a MedSAM-based vision-language model with disentanglement and localization constraints to produce clinical-concept rationales grounded in visual evidence.
Problem
Medical segmentation and detection models output masks or labels without clinically meaningful rationales, while text-based explanations lack spatial grounding; paired image-mask-rationale data and pixel-level concept annotations are scarce.
Approach
Extract radiologist-style rationales from PI-RADS reports using GPT-4o guided by a structured PI-RADS decision tree, then train a shared image-text embedding with segmentation loss plus disentanglement and localization constraints so that concept heatmaps localize without pixel-level concept labels.
Key results
- Lesion AP 0.574 and AUROC 0.888 on the rationale dataset, outperforming U-Net and other baselines in cancer detection.
- Visual evidence RMA of 0.403 on the rationale dataset versus 0.010 for the model without constraints.
- Zero-shot on Prostate158 averages DSC 0.607 vs 0.558 for the best baseline (U-Net), with AP 0.565 vs 0.491.
Measured effects reported in the paper
| What was changed | Where | Measured | Effect |
|---|---|---|---|
| Add rationale-informed optimization with image-text rationales | Prostate tumor segmentation and detection model · Prostate158 zero-shot | Lesion DSC: 0.383 -> 0.426 | Helped |
| Add rationale-informed optimization with image-text rationales | Prostate tumor segmentation and detection model · Prostate158 zero-shot | AP: 0.491 -> 0.565 | Helped |
| Add rationale-informed optimization with image-text rationales | Prostate tumor segmentation and detection model · MSD-Prostate zero-shot | Zone DSC: 0.709 -> 0.717 | Helped |
| Add disentanglement and localization constraints (ablation) | Rationale-informed optimization · Rationale Dataset | Visual evidence RMA: 0.010 -> 0.403 | Helped |
| Add disentanglement and localization constraints (ablation) | Rationale-informed optimization · Prostate158 | Visual evidence RMA: 0.024 -> 0.330 | Helped |
| Add disentanglement and localization constraints (ablation) | Rationale-informed optimization · MSD-Prostate | Visual evidence RMA: 0.012 -> 0.497 | Helped |
| Add disentanglement and localization constraints (ablation) | Rationale-informed optimization · Rationale Dataset | Segmentation DSC: 0.758 -> 0.746 | Hurt |
| Add disentanglement constraint only (ablation) | Rationale-informed optimization · Rationale Dataset | Visual evidence RMA: 0.010 -> 0.024 | Helped |
| Add disentanglement constraint only (ablation) | Rationale-informed optimization · Rationale Dataset | Segmentation DSC: 0.758 -> 0.747 | Hurt |
| Add localization constraint to disentanglement constraint (ablation) | Rationale-informed optimization · Rationale Dataset | Visual evidence RMA: 0.024 -> 0.403 | Helped |
| Add localization constraint to disentanglement constraint (ablation) | Rationale-informed optimization · Rationale Dataset | Segmentation DSC: 0.747 -> 0.746 | Hurt |
Surprising findings
- OpenAI o1 performed worse than random guessing on tumor classification, location, and PI-RADS score prediction in the authors' 20-scan test.
- Using the disentanglement constraint alone led to trivial solutions with poor visual evidence localization (RMA 0.024).
Limitations
- Rationale dataset covers prostate cancer only.
- Lesion segmentation DSC on the rationale dataset is lower than some baselines (e.g., 0.552 vs 0.504 for U-Net on lesion but lower on gland), and the model is weaker on gland segmentation than U-Net and Swin UNETR.
- Explanations are not a substitute for radiologist judgment; over-reliance risk.
Experimental setup
Datasets: PI-CAI Prostate158 MSD-Prostate
Benchmarks: Rationale Dataset Prostate158 MSD-Prostate
Metrics: DSC AP AUROC RMA precision recall F1
Baselines: U-Net ITUNet Swin UNETR CSwin U-Net SSL CSwin U-Net MA-SAM SAMed BiomedParse OpenAI o1
Builds on: MedSAM BiomedCLIP InfoNCE contrastive learning Grad-CAM
Closest papers by meaning
- Enhancing SAM with Efficient Prompting and Preference Optimization for Semi-supervised Medical Image Segmentation (CVPR 2025 · similarity 0.86)
- TumorChain: Interleaved Multimodal Chain-of-Thought Reasoning for Traceable Clinical Tumor Analysis (ICLR 2026 · similarity 0.86)
- CG-Reasoner: Centroid-Guided Positional Reasoning Segmentation for Medical Imaging with a Robust Visual-Text Consistency Metric (CVPR 2026 · similarity 0.85)
- MedReasoner: Reinforcement Learning Drives Reasoning Grounding from Clinical Thought to Pixel-Level Precision (AAAI 2026 · similarity 0.85)
- CAT: Coordinating Anatomical-Textual Prompts for Multi-Organ and Tumor Segmentation (NeurIPS 2024 · similarity 0.85)
- Training Like a Medical Resident: Context-Prior Learning Toward Universal Medical Image Segmentation (CVPR 2024 · similarity 0.85)
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