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MedXpertQA: Benchmarking Expert-Level Medical Reasoning and Understanding
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Introduces MedXpertQA, a 4,460-question expert-level medical benchmark with a text subset and a multimodal subset with clinical-scenario images, and evaluates 18 LLMs/LMMs.
Problem
Existing medical QA and multimodal VQA benchmarks are too easy, lack specialty breadth and clinical detail, and rely on auto-generated QA from captions, so they cannot assess expert-level medical reasoning.
Approach
Builds a difficulty-filtered, specialty-covering medical exam benchmark using AI-expert and human-Brier-score filtering, LLM-based question/option augmentation to reduce leakage, expert review, and a Reasoning vs Understanding split for evaluating o1-like models.
Key results
- GPT-4o reaches 30.37% average on MedXpertQA-Text and 42.80% on MedXpertQA-MM, versus 45.20% for pre-licensed experts on the Understanding set and 43.92% overall on Text.
- o1 scores 44.67% on MedXpertQA-Text (on a 10% sample) and 56.28% on MM, the best among evaluated models, while the best open model Qwen2.5-VL-72B reaches 23.35% on Text average.
- On Text, DeepSeek-R1 reaches 37.76% average versus 24.16% for DeepSeek-V3, and gaps between Reasoning and Understanding narrow for o1-like models.
Measured effects reported in the paper
| What was changed | Where | Measured | Effect |
|---|---|---|---|
| Apply inference-time scaling to DeepSeek-V3, Qwen2.5-32B-Instruct, and Qwen2-VL-72B | DeepSeek-R1, QwQ-32B-Preview, and QVQ-72B-Preview · MedXpertQA Reasoning and Understanding subsets | accuracy | Mixed |
| Rephrase questions and augment answer options | MedXpertQA · Leakage analysis | perplexity: 1.03E+218 -> 1.35E+247 | Helped |
| Rephrase questions and augment answer options | MedXpertQA · Leakage analysis | Rouge-L: 0.1893 -> 0.1664 | Helped |
Surprising findings
- Vanilla LLMs and LMMs score lower on the Reasoning subset than on the Understanding subset, but this gap narrows or reverses for o1-like inference-time scaled models.
- Expert pre-licensed baseline (43.92%) is only modestly above strong models such as o1 on the text subset, showing limited headroom for frontier models.
Limitations
- Full test data is withheld to prevent leakage, so evaluation depends on the authors' release policy.
- o1 and o3-mini were evaluated only on 10% samples due to cost, adding variance.
- Benchmark is multiple-choice and mostly US-centric; authors note performance does not imply clinical readiness.
Experimental setup
Datasets: USMLE COMLEX-USA ACR DXIT/TXIT EDiR NEJM Image Challenge ABMS specialty board exams
Benchmarks: MedXpertQA-Text MedXpertQA-MM
Metrics: accuracy
Baselines: GPT-4o o1 DeepSeek-R1 Claude-3.5-Sonnet Gemini-1.5-Pro Gemini-2.0-Flash Qwen2.5-VL-72B Qwen2-VL-72B QVQ-72B-Preview o3-mini
Builds on: MedQA MMMU OmniMedVQA MMLU-Pro
Closest papers by meaning
- MedAtlas: Evaluating LLMs for Multi-Round, Multi-Task Medical Reasoning Across Diverse Imaging Modalities and Clinical Text (AAAI 2026 · similarity 0.91)
- Med-CMR: A Fine-Grained Benchmark Integrating Visual Evidence and Clinical Logic for Medical Complex Multimodal Reasoning (CVPR 2026 · similarity 0.89)
- Medical thinking with multiple images (ICLR 2026 · similarity 0.89)
- MedCalc-Bench: Evaluating Large Language Models for Medical Calculations (NeurIPS 2024 · similarity 0.88)
- Medmarks: A Comprehensive Open-Source LLM Benchmark Suite for Medical Tasks (NeurIPS 2026 · similarity 0.88)
- MediConfusion: Can you trust your AI radiologist? Probing the reliability of multimodal medical foundation models (ICLR 2025 · similarity 0.88)
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