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Research map / Probabilistic and scientific modeling / Molecules and proteins

Learning to Discover Sparse Graphical Models

ICML 2017 · Probabilistic and scientific modeling › Molecules and proteins · approach: Sparse graphical and tensor models · 11 citations (OpenAlex)

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Measured effects reported in the paper

What was changedWhereMeasuredEffect
learn the edge estimator from synthetic sparse-graph samples instead of relying on penalized likelihoodDeepGraph-39 · Gaussian random graphs (n=35,p=39)Prec@5%: 0.441 $\pm$ 0.011 -> 0.463 $\pm$ 0.009Helped
learn the edge estimator from synthetic sparse-graph samples instead of relying on penalized likelihoodDeepGraph-39 · Gaussian random graphs (n=100,p=39)Prec@5%: 0.648 $\pm$ 0.012 -> 0.567 $\pm$ 0.009Hurt
learn the edge estimator from synthetic sparse-graph samples instead of relying on penalized likelihoodDeepGraph-39 · Gaussian random graphs (n=15,p=39)Prec@5%: 0.261 $\pm$ 0.009 -> 0.326 $\pm$ 0.009Helped
learn the edge estimator from synthetic sparse-graph samples instead of relying on penalized likelihoodDeepGraph-39 · Laplace random graphs (n=35,p=39)Prec@5%: 0.298 $\pm$ 0.009 -> 0.415 $\pm$ 0.010Helped
learn the edge estimator from synthetic sparse-graph samples instead of relying on penalized likelihoodDeepGraph-39 · Gaussian small-world graphs (n=35,p=39)Prec@5%: 0.428 $\pm$ 0.007 -> 0.479 $\pm$ 0.007Helped
average predictions across input permutations (ablation)DeepGraph-39 · Gaussian random graphs (n=35,p=39)Prec@5%: 0.463 $\pm$ 0.009 -> \bm{$0.487 \pm 0.010$}Helped
average predictions across input permutations (ablation)DeepGraph-39 · Gaussian random graphs (n=100,p=39)Prec@5%: 0.567 $\pm$ 0.009 -> $0.581 \pm 0.008$Helped
average predictions across input permutations (ablation)DeepGraph-39 · Gaussian random graphs (n=15,p=39)Prec@5%: 0.326 $\pm$ 0.009 -> \bm{$0.360 \pm 0.010$}Helped
average predictions across input permutations (ablation)DeepGraph-39 · Laplace random graphs (n=35,p=39)Prec@5%: 0.415 $\pm$ 0.010 -> \bm{$0.445 \pm 0.011$}Helped
average predictions across input permutations (ablation)DeepGraph-39 · Gaussian small-world graphs (n=35,p=39)Prec@5%: \bm{$0.479 \pm 0.007$} -> 0.453 $\pm$ 0.007Hurt
fine-tune on 1000 small-world and 1000 original-prior examples (ablation)DeepGraph-39 · Gaussian small-world graphs (n=35,p=39)Prec@5%: \bm{$0.479 \pm 0.007$} -> \bm{$0.560 \pm 0.008$}Helped
average predictions across input permutations (ablation)DeepGraph-500 · Gaussian random graphs (n=50,p=500)Prec@0.05%: 0.449 $\pm$ 0.018 -> $\bm{0.583 \pm 0.018}$Helped

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