% Key papers for Recurrent circuit models of inference (scime atlas, https://atlas.scime.ai). Authors are not included: add them from the paper pages. @inproceedings{neurips2017_infogail_56385, title = {{InfoGAIL: Interpretable Imitation Learning from Visual Demonstrations}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2017}, url = {https://nips.cc/virtual/2017/poster/9163}, } @inproceedings{neurips2017_reconstructing_56613, title = {{Reconstructing perceived faces from brain activations with deep adversarial neural decoding}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2017}, url = {https://nips.cc/virtual/2017/poster/9204}, } @inproceedings{neurips2017_neural_56509, title = {{Neural Networks for Efficient Bayesian Decoding of Natural Images from Retinal Neurons}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2017}, url = {https://nips.cc/virtual/2017/poster/9413}, } @inproceedings{neurips2020_reverse_60718, title = {{Reverse-engineering recurrent neural network solutions to a hierarchical inference task for mice}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2020}, url = {https://nips.cc/virtual/2020/poster/18982}, } @inproceedings{neurips2018_manifold_57356, title = {{Manifold-tiling Localized Receptive Fields are Optimal in Similarity-preserving Neural Networks}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2018}, url = {https://nips.cc/virtual/2018/poster/11682}, } @inproceedings{neurips2017_quantifying_56603, title = {{Quantifying how much sensory information in a neural code is relevant for behavior}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2017}, url = {https://nips.cc/virtual/2017/poster/9151}, } @inproceedings{neurips2016_a_55526, title = {{A Bayesian method for reducing bias in neural representational similarity analysis}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2016}, url = {https://nips.cc/virtual/2016/poster/6896}, } @inproceedings{neurips2018_efficient_57089, title = {{Efficient inference for time-varying behavior during learning}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2018}, url = {https://nips.cc/virtual/2018/poster/11555}, } @inproceedings{neurips2018_generalisation_57159, title = {{Generalisation of structural knowledge in the hippocampal-entorhinal system}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2018}, url = {https://nips.cc/virtual/2018/poster/11811}, } @inproceedings{neurips2017_model_56481, title = {{Model-based Bayesian inference of neural activity and connectivity from all-optical interrogation of a neural circuit}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2017}, url = {https://nips.cc/virtual/2017/poster/9132}, } @inproceedings{neurips2018_learning_57303, title = {{Learning a latent manifold of odor representations from neural responses in piriform cortex}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2018}, url = {https://nips.cc/virtual/2018/poster/11525}, } @inproceedings{neurips2019_better_57947, title = {{Better Transfer Learning with Inferred Successor Maps}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2019}, url = {https://nips.cc/virtual/2019/poster/14572}, } @inproceedings{neurips2017_training_56738, title = {{Training recurrent networks to generate hypotheses about how the brain solves hard navigation problems}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2017}, url = {https://nips.cc/virtual/2017/poster/9230}, } @inproceedings{neurips2020_efficient_59776, title = {{Efficient estimation of neural tuning during naturalistic behavior}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2020}, url = {https://nips.cc/virtual/2020/poster/19021}, } @inproceedings{aaai2018_the_100576, title = {{The Structural Affinity Method for Solving the Raven's Progressive Matrices Test for Intelligence}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2018}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/11323}, } @inproceedings{iclr2023_disentanglement_32169, title = {{Disentanglement with Biological Constraints: A Theory of Functional Cell Types}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2023}, url = {https://iclr.cc/virtual/2023/poster/10981}, } @inproceedings{neurips2021_latent_62636, title = {{Latent Equilibrium: A unified learning theory for arbitrarily fast computation with arbitrarily slow neurons}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2021}, url = {https://nips.cc/virtual/2021/poster/27114}, } @inproceedings{neurips2022_distinguishing_64018, title = {{Distinguishing discrete and continuous behavioral variability using warped autoregressive HMMs}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2022}, url = {https://nips.cc/virtual/2022/poster/52869}, } @inproceedings{neurips2021_a_61382, title = {{A universal probabilistic spike count model reveals ongoing modulation of neural variability}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2021}, url = {https://nips.cc/virtual/2021/poster/26252}, } @inproceedings{neurips2021_impression_61998, title = {{Impression learning: Online representation learning with synaptic plasticity}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2021}, url = {https://nips.cc/virtual/2021/poster/28033}, } @inproceedings{neurips2024_model_74086, title = {{Model Based Inference of Synaptic Plasticity Rules}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2024}, url = {https://neurips.cc/virtual/2024/poster/93446}, } @inproceedings{neurips2025_from_80462, title = {{From Synapses to Dynamics: Obtaining Function from Structure in a Connectome Constrained Model of the Head Direction Circuit}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2025}, url = {https://openreview.net/forum?id=zn4F6os6cq}, } @inproceedings{neurips2024_active_73811, title = {{Active learning of neural population dynamics using two-photon holographic optogenetics}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2024}, url = {https://neurips.cc/virtual/2024/poster/93697}, } @inproceedings{neurips2025_bridging_74939, title = {{Bridging Scales: Spectral Theory Reveals How Local Connectivity Rules Sculpt Global Neural Dynamics in Spatially Extended Networks}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2025}, url = {https://openreview.net/forum?id=2hzyfArJi6}, } @inproceedings{iclr2024_sufficient_34434, title = {{Sufficient conditions for offline reactivation in recurrent neural networks}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2024}, url = {https://iclr.cc/virtual/2024/poster/18641}, } @inproceedings{iclr2024_complex_34457, title = {{Complex priors and flexible inference in recurrent circuits with dendritic nonlinearities}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2024}, url = {https://iclr.cc/virtual/2024/poster/18617}, } @inproceedings{iclr2024_learning_34692, title = {{Learning dynamic representations of the functional connectome in neurobiological networks}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2024}, url = {https://iclr.cc/virtual/2024/poster/18382}, } @inproceedings{icml2025_cogreact_47092, title = {{CogReact: A Reinforced Framework to Model Human Cognitive Reaction Modulated by Dynamic Intervention}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2025}, url = {https://icml.cc/virtual/2025/poster/45494}, } @inproceedings{icml2026_structure_50251, title = {{Structure Abstraction and Generalization in a Hippocampal-Entorhinal Inspired World Model}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2026}, url = {https://openreview.net/forum?id=AYXgo5FjYz}, } @inproceedings{neurips2024_the_72455, title = {{The Bayesian sampling in a canonical recurrent circuit with a diversity of inhibitory interneurons}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2024}, url = {https://neurips.cc/virtual/2024/poster/94903}, } @inproceedings{neurips2024_nonlinear_73859, title = {{Nonlinear dynamics of localization in neural receptive fields}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2024}, url = {https://neurips.cc/virtual/2024/poster/93650}, } @inproceedings{neurips2024_shaping_73907, title = {{Shaping the distribution of neural responses with interneurons in a recurrent circuit model}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2024}, url = {https://neurips.cc/virtual/2024/poster/93604}, } @inproceedings{neurips2024_continuous_74635, title = {{Continuous Spatiotemporal Events Decoupling through Spike-based Bayesian Computation}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2024}, url = {https://neurips.cc/virtual/2024/poster/92957}, } @inproceedings{neurips2025_inference_74946, title = {{Inference with correlated priors using sisters cells}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2025}, url = {https://openreview.net/forum?id=2n6fd8QlEC}, } @inproceedings{neurips2025_neurons_77779, title = {{Neurons as Detectors of Coherent Sets in Sensory Dynamics}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2025}, url = {https://openreview.net/forum?id=XTHI90js2e}, } @inproceedings{neurips2025_poco_77807, title = {{POCO: Scalable Neural Forecasting through Population Conditioning}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2025}, url = {https://openreview.net/forum?id=Xma2G1ak3H}, } @inproceedings{iclr2025_shared_84162, title = {{Shared-AE: Automatic Identification of Shared Subspaces in High-dimensional Neural and Behavioral Activity}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2025}, url = {https://iclr.cc/virtual/2025/poster/27666}, } @inproceedings{iclr2026_setting_86213, title = {{Setting up for failure: automatic discovery of the neural mechanisms of cognitive errors}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2026}, url = {https://openreview.net/forum?id=NGThArVrD3}, } @inproceedings{iclr2026_tavae_87884, title = {{TAVAE: A VAE with Adaptable Priors Explains Contextual Modulation in the Visual Cortex}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2026}, url = {https://openreview.net/forum?id=gdafM5zp1h}, } @inproceedings{neurips2026_decomposing_89621, title = {{Decomposing the modulation of interactions between neuronal populations}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2026}, url = {https://neurips.cc/virtual/2026/poster/152282}, }