% Key papers for Equivariant diffusion for 3D molecules (scime atlas, https://atlas.scime.ai). Authors are not included: add them from the paper pages. @inproceedings{icml2022_equivariant_40508, title = {{Equivariant Diffusion for Molecule Generation in 3D}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2022}, url = {https://icml.cc/virtual/2022/poster/16253}, } @inproceedings{neurips2022_torsional_66336, title = {{Torsional Diffusion for Molecular Conformer Generation}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2022}, url = {https://nips.cc/virtual/2022/poster/54153}, } @inproceedings{aaai2023_mdm_4106, title = {{MDM: Molecular Diffusion Model for 3D Molecule Generation}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2023}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/25639}, } @inproceedings{iclr2023_3d_33072, title = {{3D Equivariant Diffusion for Target-Aware Molecule Generation and Affinity Prediction}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2023}, url = {https://iclr.cc/virtual/2023/poster/11022}, } @inproceedings{icml2023_geometric_43037, title = {{Geometric Latent Diffusion Models for 3D Molecule Generation}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2023}, url = {https://icml.cc/virtual/2023/poster/24562}, } @inproceedings{neurips2023_crystal_67355, title = {{Crystal Structure Prediction by Joint Equivariant Diffusion}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2023}, url = {https://nips.cc/virtual/2023/poster/72373}, } @inproceedings{iclr2024_scalable_35592, title = {{Scalable Diffusion for Materials Generation}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2024}, url = {https://iclr.cc/virtual/2024/poster/17481}, } @inproceedings{iclr2024_mofdiff_33460, title = {{MOFDiff: Coarse-grained Diffusion for Metal-Organic Framework Design}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2024}, url = {https://iclr.cc/virtual/2024/poster/19615}, } @inproceedings{iclr2024_space_35064, title = {{Space Group Constrained Crystal Generation}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2024}, url = {https://iclr.cc/virtual/2024/poster/18009}, } @inproceedings{aaai2024_geometric_6135, title = {{Geometric-Facilitated Denoising Diffusion Model for 3D Molecule Generation}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2024}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/27787}, } @inproceedings{icml2023_moldiff_42709, title = {{MolDiff: Addressing the Atom-Bond Inconsistency Problem in 3D Molecule Diffusion Generation}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2023}, url = {https://icml.cc/virtual/2023/poster/24055}, } @inproceedings{cvpr2025_dtgbrepgen_25843, title = {{DTGBrepGen: A Novel B-rep Generative Model through Decoupling Topology and Geometry}}, booktitle = {IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR)}, year = {2025}, url = {https://cvpr.thecvf.com/virtual/2025/poster/34428}, } @inproceedings{neurips2024_graph_73021, title = {{Graph Diffusion Transformers for Multi-Conditional Molecular Generation}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2024}, url = {https://neurips.cc/virtual/2024/poster/94402}, } @inproceedings{neurips2023_towards_67705, title = {{Towards Symmetry-Aware Generation of Periodic Materials}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2023}, url = {https://nips.cc/virtual/2023/poster/72046}, } @inproceedings{iclr2024_navigating_35122, title = {{Navigating the Design Space of Equivariant Diffusion-Based Generative Models for De Novo 3D Molecule Generation}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2024}, url = {https://iclr.cc/virtual/2024/poster/17951}, } @inproceedings{icml2025_all_46272, title = {{All-atom Diffusion Transformers: Unified generative modelling of molecules and materials}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2025}, url = {https://icml.cc/virtual/2025/poster/46288}, } @inproceedings{iclr2025_symmcd_84063, title = {{SymmCD: Symmetry-Preserving Crystal Generation with Diffusion Models}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2025}, url = {https://iclr.cc/virtual/2025/poster/27763}, } @inproceedings{aaai2024_disco_5683, title = {{DiSCO: Diffusion Schrödinger Bridge for Molecular Conformer Optimization}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2024}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/29238}, } @inproceedings{icml2023_coarse_41673, title = {{Coarse-to-Fine: a Hierarchical Diffusion Model for Molecule Generation in 3D}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2023}, url = {https://icml.cc/virtual/2023/poster/23731}, } @inproceedings{neurips2023_edgi_68716, title = {{EDGI: Equivariant Diffusion for Planning with Embodied Agents}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2023}, url = {https://nips.cc/virtual/2023/poster/71127}, } @inproceedings{aaai2024_vector_7760, title = {{Vector Field Oriented Diffusion Model for Crystal Material Generation}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2024}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/30224}, } @inproceedings{icml2025_wyckoffdiff_47130, title = {{WyckoffDiff -- A Generative Diffusion Model for Crystal Symmetry}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2025}, url = {https://icml.cc/virtual/2025/poster/45457}, } @inproceedings{neurips2024_generative_72040, title = {{Generative Hierarchical Materials Search}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2024}, url = {https://neurips.cc/virtual/2024/poster/95278}, } @inproceedings{aaai2025_exploit_9061, title = {{Exploit Your Latents: Coarse-Grained Protein Backmapping with Latent Diffusion Models}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2025}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/32098}, } @inproceedings{iclr2025_next_83497, title = {{NExT-Mol: 3D Diffusion Meets 1D Language Modeling for 3D Molecule Generation}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2025}, url = {https://iclr.cc/virtual/2025/poster/28319}, } @inproceedings{iclr2026_oxtal_84762, title = {{OXtal: An All-Atom Diffusion Model for Organic Crystal Structure Prediction}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2026}, url = {https://openreview.net/forum?id=6Jd5aBml0y}, } @inproceedings{icml2025_geometric_46221, title = {{Geometric Representation Condition Improves Equivariant Molecule Generation}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2025}, url = {https://icml.cc/virtual/2025/poster/46339}, } @inproceedings{icml2025_kinetic_46229, title = {{Kinetic Langevin Diffusion for Crystalline Materials Generation}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2025}, url = {https://icml.cc/virtual/2025/poster/46331}, } @inproceedings{icml2025_unimate_47617, title = {{UniMate: A Unified Model for Mechanical Metamaterial Generation, Property Prediction, and Condition Confirmation}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2025}, url = {https://icml.cc/virtual/2025/poster/44980}, } @inproceedings{neurips2024_unified_71441, title = {{Unified Guidance for Geometry-Conditioned Molecular Generation}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2024}, url = {https://neurips.cc/virtual/2024/poster/95815}, }