% Key papers for Diffusion-based graph generation (scime atlas, https://atlas.scime.ai). Authors are not included: add them from the paper pages. @inproceedings{aaai2018_graphgan_105763, title = {{GraphGAN: Graph Representation Learning With Generative Adversarial Nets}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2018}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/11872}, } @inproceedings{icml2018_graphrnn_36728, title = {{GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Models}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2018}, url = {https://icml.cc/virtual/2018/poster/2373}, } @inproceedings{icml2018_netgan_36864, title = {{NetGAN: Generating Graphs via Random Walks}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2018}, url = {https://icml.cc/virtual/2018/poster/2193}, } @inproceedings{neurips2019_efficient_58189, title = {{Efficient Graph Generation with Graph Recurrent Attention Networks}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2019}, url = {https://nips.cc/virtual/2019/poster/13582}, } @inproceedings{iclr2020_reinforcement_29553, title = {{Reinforcement Learning Based Graph-to-Sequence Model for Natural Question Generation}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2020}, url = {https://openreview.net/forum?id=HygnDhEtvr}, } @inproceedings{iclr2023_digress_32670, title = {{DiGress: Discrete Denoising diffusion for graph generation}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2023}, url = {https://iclr.cc/virtual/2023/poster/11556}, } @inproceedings{iclr2019_generative_28792, title = {{Generative Code Modeling with Graphs}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2019}, url = {https://iclr.cc/virtual/2019/poster/1000}, } @inproceedings{neurips2019_graph_58351, title = {{Graph Normalizing Flows}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2019}, url = {https://nips.cc/virtual/2019/poster/14292}, } @inproceedings{aaai2017_regularized_103937, title = {{Regularized Diffusion Process for Visual Retrieval}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2017}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/11216}, } @inproceedings{neurips2019_conditional_58027, title = {{Conditional Structure Generation through Graph Variational Generative Adversarial Nets}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2019}, url = {https://nips.cc/virtual/2019/poster/13353}, } @inproceedings{cvpr2021_hdmapgen_17100, title = {{HDMapGen: A Hierarchical Graph Generative Model of High Definition Maps}}, booktitle = {IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR)}, year = {2021}, } @inproceedings{icml2018_contextual_36595, title = {{Contextual Graph Markov Model: A Deep and Generative Approach to Graph Processing}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2018}, url = {https://icml.cc/virtual/2018/poster/2084}, } @inproceedings{icml2019_graphite_37411, title = {{Graphite: Iterative Generative Modeling of Graphs}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2019}, url = {https://icml.cc/virtual/2019/poster/4008}, } @inproceedings{icml2022_score_41153, title = {{Score-based Generative Modeling of Graphs via the System of Stochastic Differential Equations}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2022}, url = {https://icml.cc/virtual/2022/poster/18139}, } @inproceedings{aaai2023_boundary_3198, title = {{Boundary Graph Neural Networks for 3D Simulations}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2023}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/26092}, } @inproceedings{aaai2020_convergence_102700, title = {{Convergence of Opinion Diffusion is PSPACE-Complete}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2020}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/6197}, } @inproceedings{aaai2019_learning_99947, title = {{Learning Diffusions without Timestamps}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2019}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/3833}, } @inproceedings{neurips2022_deep_65868, title = {{Deep Generative Model for Periodic Graphs}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2022}, url = {https://nips.cc/virtual/2022/poster/54872}, } @inproceedings{aaai2020_graph_100273, title = {{Graph-Driven Generative Models for Heterogeneous Multi-Task Learning}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2020}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/5446}, } @inproceedings{aaai2021_content_303, title = {{Content Learning with Structure-Aware Writing: A Graph-Infused Dual Conditional Variational Autoencoder for Automatic Storytelling}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2021}, url = {https://aaai.org/papers/06021-content-learning-with-structure-aware-writing-a-graph-infused-dual-conditional-variational-autoencoder-for-automatic-storytelling/}, } @inproceedings{aaai2024_hyperbolic_6237, title = {{Hyperbolic Graph Diffusion Model}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2024}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/29512}, } @inproceedings{aaai2025_gsdiff_9293, title = {{GSDiff: Synthesizing Vector Floorplans via Geometry-enhanced Structural Graph Generation}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2025}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/33904}, } @inproceedings{aaai2024_dag_5548, title = {{DAG-Aware Variational Autoencoder for Social Propagation Graph Generation}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2024}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/28694}, } @inproceedings{cvpr2025_brepgiff_25616, title = {{BrepGiff: Lightweight Generation of Complex B-rep with 3D GAT Diffusion}}, booktitle = {IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR)}, year = {2025}, url = {https://cvpr.thecvf.com/virtual/2025/poster/35112}, } @inproceedings{neurips2024_fairwire_72425, title = {{FairWire: Fair Graph Generation}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2024}, url = {https://neurips.cc/virtual/2024/poster/94931}, } @inproceedings{aaai2025_glad_9278, title = {{GLAD: Improving Latent Graph Generative Modeling with Simple Quantization}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2025}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/34169}, } @inproceedings{neurips2024_pard_74470, title = {{Pard: Permutation-Invariant Autoregressive Diffusion for Graph Generation}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2024}, url = {https://neurips.cc/virtual/2024/poster/93104}, } @inproceedings{icml2024_hyperbolic_43528, title = {{Hyperbolic Geometric Latent Diffusion Model for Graph Generation}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2024}, url = {https://icml.cc/virtual/2024/poster/34924}, } @inproceedings{neurips2024_discrete_72713, title = {{Discrete-state Continuous-time Diffusion for Graph Generation}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2024}, url = {https://neurips.cc/virtual/2024/poster/94674}, } @inproceedings{aaai2025_fap_9100, title = {{FAP-CD: Fairness-Driven Age-Friendly Community Planning via Conditional Diffusion Generation}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2025}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/35036}, } @inproceedings{iclr2024_higen_34166, title = {{HiGen: Hierarchical Graph Generative Networks}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2024}, url = {https://iclr.cc/virtual/2024/poster/18909}, } @inproceedings{icml2024_a_45841, title = {{A Graph is Worth \$K\$ Words: Euclideanizing Graph using Pure Transformer}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2024}, url = {https://icml.cc/virtual/2024/poster/32612}, } @inproceedings{icml2025_graphgpt_46075, title = {{GraphGPT: Generative Pre-trained Graph Eulerian Transformer}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2025}, url = {https://icml.cc/virtual/2025/poster/46483}, } @inproceedings{icml2025_graph_46702, title = {{Graph Generative Pre-trained Transformer}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2025}, url = {https://icml.cc/virtual/2025/poster/45870}, } @inproceedings{icml2025_defog_46936, title = {{DeFoG: Discrete Flow Matching for Graph Generation}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2025}, url = {https://icml.cc/virtual/2025/poster/45644}, } @inproceedings{icml2026_flag_55393, title = {{FLAG: Foundation model representation with Latent diffusion Alignment via Graph for spatial gene expression prediction}}, booktitle = {International Conference on Machine Learning (ICML)}, year = {2026}, url = {https://openreview.net/forum?id=yY7rywRtlI}, } @inproceedings{neurips2024_graph_70780, title = {{Graph Diffusion Policy Optimization}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2024}, url = {https://neurips.cc/virtual/2024/poster/96349}, } @inproceedings{neurips2024_unifying_73706, title = {{Unifying Generation and Prediction on Graphs with Latent Graph Diffusion}}, booktitle = {Advances in Neural Information Processing Systems (NeurIPS)}, year = {2024}, url = {https://neurips.cc/virtual/2024/poster/93791}, } @inproceedings{aaai2026_ngtm_107812, title = {{NGTM: Substructure-based Neural Graph Topic Model for Interpretable Graph Generation}}, booktitle = {AAAI Conference on Artificial Intelligence (AAAI)}, year = {2026}, url = {https://ojs.aaai.org/index.php/AAAI/article/view/40164}, } @inproceedings{iclr2024_efficient_33530, title = {{Efficient and Scalable Graph Generation through Iterative Local Expansion}}, booktitle = {International Conference on Learning Representations (ICLR)}, year = {2024}, url = {https://iclr.cc/virtual/2024/poster/19545}, }