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Research map / Probabilistic and scientific modeling / Molecules and proteins

Measuring Dependence with Matrix-based Entropy Functional

AAAI 2021 · Probabilistic and scientific modeling › Molecules and proteins · approach: Prediction-powered and conformal inference · 31 citations (OpenAlex)

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Measured effects reported in the paper

What was changedWhereMeasuredEffect
Use Iα* instead of the strongest listed pairwise dependence baselineDREAM4 gene regulatory network inference · DREAM4 Networks 1–5AUC: Network 1: 0.75 -> 0.78; Network 2: 0.76 -> 0.87; Network 3: 0.83 -> 0.84; Network 5: 0.89 -> 0.97Helped
Train with Iα*(x;e) loss instead of HSIC lossFashion-MNIST classifier under covariate shift · Fashion-MNIST source and targettest accuracy (%): Source: 91.03±0.003 -> 91.17±0.040; Target: 76.56±0.034 -> 76.79±0.040Helped
Use Tα* or Dα* to select subspaces before LOF instead of full-space LOFSubspace outlier detection · ODDS datasetsAUC: Diabetes: 0.68 vs 0.68; Cardio: 0.75 vs 0.68; Musk: 0.83 vs 0.42; Speech: 0.58 vs 0.36; breastW: 0.71 vs 0.46Mixed
Use DIB regularization instead of VIBMNIST MLP · MNIST permutation-invarianttest error (%): 1.17 -> 1.13Helped
Use DIB regularization instead of VIBVGG16 · CIFAR-10test error (%): 9.31 -> 5.66Helped
Replace HSIC loss with Hα(e) lossFashion-MNIST classifier under covariate shift · Fashion-MNIST source and targettest accuracy (%): Source: 91.03±0.003 -> 91.10±0.013; Target: 76.56±0.034 -> 75.48±0.069Mixed
Average Iα* estimates over random subsamples rather than using the full sample (ablation)Iα* dependence test · Synthetic decaying-dependence testdependence detection powerHurt
Average Tα* estimates over random subsamples rather than using the full sample (ablation)Tα* dependence score · Synthetic Data Bdependence score agreement with expected valuesNo clear effect

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