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History-Aware Conformal Prediction Sets for Censored Time-to-Event Outcomes
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Proposes HAPS, a split-conformal framework that builds two-sided prediction intervals for event times among survivors at a decision time using time-varying covariate histories, with IPCW censoring adjustment, plus doubly robust variants (HAPS-DR, HAPS-A).
Problem
Conformal prediction for individual event times under right censoring is static (baseline covariates only), yielding wide, uninformative intervals for individuals who have survived to a decision time; censoring depends on time-varying covariates, which existing methods do not adjust for.
Approach
Calibrate a scalar parameter indexing nested quantile-based interval candidates at the decision time using IPCW (and AIPCW/post-processing doubly robust) estimating equations built on time-varying covariate histories, targeting survivor-conditional coverage.
Key results
- In simulations, HAPS reduces median interval length by 34-75% relative to baselines at tau=6 while achieving near-nominal (~90%) coverage; at tau=3 reductions are 5-23%.
- On colon and PBC data at year 5, HAPS and HAPS-DR reduce median interval length by 13-60% (colon) and 9-22% (PBC) relative to baseline methods.
- HAPS-DR tends to overcover in simulations, while HAPS undercovers under misspecified censoring models.
Surprising findings
- Baseline IPCW and trunc overcover at later prediction times, and even at tau=0 baselines show coverage gaps because baseline-only censoring adjustment is insufficient.
- The baseline-only static intervals are close to zero for lower bounds even with oracle quantiles, showing baseline covariates alone are too uninformative.
Limitations
- Validity relies on conditional independent censoring given observed covariate history and positivity; violations may give invalid coverage.
- HAPS undercovers under censoring model misspecification; HAPS-DR is conservative, especially with small samples or poorly trained prediction models.
- HAPS-A requires estimating additional nuisance functions (h_tau), which is computationally demanding and can be unstable in small samples.
Experimental setup
Datasets: colon (survival R package) pbcseq (survival R package) simulated DGM1 simulated DGM2
Benchmarks: simulation DGM1 and DGM2 colon pbcseq
Metrics: empirical survivor-conditional coverage median prediction interval length IPCW estimate of survivor-conditional coverage
Baselines: IPCW trunc LM
Builds on: conformal prediction inverse probability of censoring weighting Dynamic-DeepHit AIPCW conformalized survival analysis
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