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ParFam -- (Neural Guided) Symbolic Regression via Continuous Global Optimization

ICLR 2025 · Probabilistic and scientific modeling › Molecules and proteins · approach: Sparse concepts and hypothesis testing

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Introduces ParFam, a continuous-optimization symbolic regression method using rational-layer parametric families solved with basin-hopping, plus DL-ParFam which uses a pre-trained Set Transformer to predict family structure.

Problem

Symbolic regression requires searching a discrete space of formulas; existing continuous-optimization SR methods (e.g., EQL) struggle with local minima and restricted expressivity, and many SR methods are slow or unreliable on SRBench ground-truth problems.

Approach

Translate SR into continuous optimization via a single-hidden-layer residual-like parametric family in which linear connections are replaced by rational functions and unary physical base functions (sin, exp, sqrt) are used; optimize coefficients with basin-hopping plus L-BFGS fine-tuning, and predict the family structure with a pre-trained Set Transformer (DL-ParFam).

Key results

Measured effects reported in the paper

What was changedWhereMeasuredEffect
Use ParFam instead of the other evaluated methodsSRBench ground-truth problems · SRBench ground-truth problems, with and without noiseaccuracy solution rateHelped
Use ParFam instead of competing methodsSRBench ground-truth problems · SRBench ground-truth problemssymbolic solution rateMixed
Add pretrained neural guidance to predict ParFam model parametersParFam · SRBench ground-truth problemstraining time: up to a hundred times fasterHelped
Add pretrained neural guidance to predict ParFam model parametersParFam · SRBench ground-truth problemssymbolic solution rateHurt
Add pretrained neural guidance to predict ParFam model parametersParFam · SRBench ground-truth problemsaccuracy solution rateHurt
Use ParFam on black-box problemsParFam · SRBench black-box problems (77 problems, at most 10 variables)median R²Mixed
Use basin-hopping rather than the other tested optimizers (ablation)ParFam · Feynman subset (15 problems)symbolic solution rateHelped
Replace basin-hopping with BFGS multi-start (ablation)ParFam · Feynman subset (15 problems)symbolic solution rateNo clear effect
Replace basin-hopping with BFGS multi-start (ablation)ParFam · Feynman subset (15 problems)accuracy solution rateNo clear effect
Use the pretrained Set Transformer on Feynman rather than synthetic dataDL-ParFam parameter predictor · Feynman and synthetic datasetstop-3 correct model-parameter rate: 50.2% -> 38.0%Hurt

Surprising findings

Limitations

Experimental setup

Datasets: SRBench Feynman SRBench Strogatz SRBench black-box datasets synthetic functions for DL-ParFam pre-training

Benchmarks: SRBench Feynman SRBench Strogatz SRBench black-box

Metrics: symbolic solution rate accuracy solution rate (R^2>0.999) median R^2 formula complexity training time

Baselines: PySR AI Feynman uDSR EndToEnd Operon MRGP EQL NeSymRes SNR

Builds on: EQL SRBench basin-hopping SNR NeSymRes

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