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Class conditional conformal prediction for multiple inputs by p-value aggregation

NeurIPS 2025 · Label-efficient and robust learning › Recognition and long-tail · approach: Learning from unlabeled and positive-unlabeled data · 0 citations (OpenAlex)

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Proposes class-conditional conformal prediction for multi-input (multiple images of one instance) classification by aggregating per-observation conformal p-values using their exact joint distribution, with score-based envelopes and refined majority voting.

Problem

Class-conditional conformal prediction sets become large when multiple observations of the same instance are available at test time and naive aggregation of softmax scores breaks exchangeability; classes with few calibration points make class-conditional calibration hard.

Approach

Perform class-conditional conformal p-values per observation, derive their exact joint distribution (with ties handled via randomization), and aggregate the p-value vector with envelope score functions (quantile, l_q-area, l_q distance to identity) calibrated by Monte Carlo; also refine majority voting with Beta-Binomial quantiles.

Key results

Measured effects reported in the paper

What was changedWhereMeasuredEffect
Aggregate the class-conditional conformal p-values with the ℓ2 envelopeConformal prediction with multiple inputs · Synthetic data, m=20average prediction set size: 6.6 -> 3.6Helped
Use p-value aggregation instead of majority-vote aggregationMultiple-input conformal prediction · Synthetic dataprediction set sizeHelped
Replace the ordinary majority-vote threshold with the Beta-Binomial quantileMajority-vote conformal prediction · Synthetic dataprediction set sizeHelped
Approximate the Beta-Binomial quantile with a Binomial quantileMajority-vote conformal prediction · Synthetic data, large mclass-conditional coverageHurt
Use temperature 1 rather than temperature 20 (ablation)LifeCLEF prediction methods · LifeCLEF Plant Identification Task 2015prediction set sizeMixed
Replace the softmax score with the APS score (ablation)P-value aggregation methods · LifeCLEF Plant Identification Task 2015prediction set sizeNo clear effect
Use p-value aggregation when multi-input observations violate exchangeability (ablation)P-value aggregation methods · LifeCLEF Plant Identification Task 2015, correlated multi-inputscoverageHurt
Use majority-vote methods instead of p-value aggregation under strong within-input dependenceMultiple-input conformal prediction · LifeCLEF Plant Identification Task 2015, correlated multi-inputscoverageHelped
Calibrate on aggregated multi-input scores rather than individual observations (ablation)Class-conditional conformal prediction · LifeCLEF Plant Identification Task 2015prediction set lengthHurt

Surprising findings

Limitations

Experimental setup

Datasets: LifeCLEF Plant Identification Task 2015 Pl@ntNet-300K synthetic Gaussian mixture

Benchmarks: LifeCLEF Plant Identification Task 2015 synthetic Gaussian mixture

Metrics: marginal coverage class-conditional coverage average prediction set size

Baselines: Majority vote Exchangeable majority Binomial quantile voting Naive aggregation of softmax scores

Builds on: split conformal prediction class-conditional conformal prediction conformal majority voting (Gasparin et al.) template methods for multiple testing

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