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Unifying Text Semantics and Graph Structures for Temporal Text-attributed Graphs with Large Language Models
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Proposes CROSS, a framework that extends existing TGNNs for temporal text-attributed graphs by using an LLM (DeepSeek-v2) to dynamically summarize evolving node neighborhoods and a semantic-structural co-encoder that mixes text and structure layer by layer.
Problem
Modeling temporal text-attributed graphs (TTAGs), where text semantics around nodes evolve over time and interact with graph structure; existing TGNNs embed text statically and fuse modalities only shallowly.
Approach
An LLM is prompted at sampled timestamps to summarize each node's textual neighborhood (temporal semantics extractor), and a co-encoder alternates Transformer-based semantic layers, TGNN structural layers and a cross-modal mixer so semantics and structure reinforce each other during encoding.
Key results
- CROSS with TGN backbone reaches 95.84% MRR on Enron transductive vs 73.05% for TGN, and average MRR gains of 22-26 points across TGAT, TGN, DyGFormer backbones.
- On the Industrial fraud node-classification task, CROSS gives an AUC gain of about 3.7% (per abstract).
- LLM zero-shot and one-shot DeepSeek-v2 link prediction is far below TGNN baselines (e.g., 24.18% and 46.27% MRR on Enron).
Measured effects reported in the paper
| What was changed | Where | Measured | Effect |
|---|---|---|---|
| Add CROSS to TGNN backbones | TGAT, TGN, and DyGFormer · Temporal link prediction, all five datasets and both settings | MRR (%): Avg.↑26.59; Avg.↑25.45; Avg.↑22.03 | Helped |
| Replace raw text with LLM-generated text in semantic encoding (ablation) | TGAT semantic encoding · Enron transductive | MRR (%): 49.73 ± 0.8 -> 63.07 ± 0.5; ↑13.34 | Helped |
| Replace raw text with LLM-generated text in semantic encoding (ablation) | TGAT semantic encoding · ICEWS1819 transductive | MRR (%): 77.45 ± 0.5 -> 85.04 ± 1.5; ↑7.59 | Helped |
| Replace raw text with LLM-generated text in structural encoding (ablation) | TGAT structural encoding · Enron transductive | MRR (%): 66.06 ± 0.1 -> 63.65 ± 1.7; ↓2.41 | Hurt |
| Replace raw text with LLM-generated text in structural encoding (ablation) | TGAT structural encoding · ICEWS1819 transductive | MRR (%): 85.81 ± 0.2 -> 86.12 ± 0.1; ↑0.31 | Helped |
| Use semantic-structural co-encoding with LLM-generated text rather than structural encoding with LLM-generated text (ablation) | TGAT backbone · Enron transductive | MRR (%): 63.65 ± 1.7 -> 95.58 ± 0.7 | Helped |
| Use semantic-structural co-encoding with LLM-generated text rather than structural encoding with LLM-generated text (ablation) | DyGFormer backbone · ICEWS1819 inductive | MRR (%): 77.70 ± 0.8 -> 87.80 ± 0.6 | Helped |
| Mix all semantic representations instead of only the latest semantic representation (ablation) | CROSS cross-modal mixer · Temporal link prediction | MRR (%) | No clear effect |
| Remove any single model component (ablation) | CROSS with TGN backbone · Temporal link prediction | MRR (%) | Hurt |
| Use DeepSeek-v2 rather than other tested LLM backbones (ablation) | CROSS on GDELT · GDELT | MRR (%) | Helped |
Surprising findings
- LLM-generated summaries give only marginal gains or slight degradation when used with structural encoding alone, suggesting structural encoding adds irrelevant high-order information.
- Mixing all historical semantic representations does not improve performance; using only the latest one works better.
Limitations
- Relies on paid LLM API calls (DeepSeek-v2) for summarization, limiting cost-efficiency at scale.
- Industrial dataset is private, limiting reproducibility.
- Cross-modal mixer uses only the latest semantic representation, discarding older temporal semantics.
Experimental setup
Datasets: Enron GDELT ICEWS1819 Googlemap_CT Industrial
Benchmarks: Enron GDELT ICEWS1819 Googlemap_CT Industrial
Metrics: MRR AUC AP
Baselines: JODIE DyRep TGAT TGN CAWN PINT TCL GraphMixer DyGFormer LKD4DyTAG FreeDyG DeepSeek-v2 zero/one-shot
Builds on: TGAT TGN DyGFormer MiniLM
Closest papers by meaning
- DTGB: A Comprehensive Benchmark for Dynamic Text-Attributed Graphs (NeurIPS 2024 · similarity 0.91)
- SSTAG: Structure-Aware Self-Supervised Learning Method for Text-Attributed Graphs (NeurIPS 2025 · similarity 0.89)
- TGB 2.0: A Benchmark for Learning on Temporal Knowledge Graphs and Heterogeneous Graphs (NeurIPS 2024 · similarity 0.89)
- TEG-DB: A Comprehensive Dataset and Benchmark of Textual-Edge Graphs (NeurIPS 2024 · similarity 0.88)
- Generalization Principles for Inference over Text-Attributed Graphs with Large Language Models (ICML 2025 · similarity 0.88)
- TGLsta: Low-resource Textual Graph Learning with Semantic and Topological Awareness via LLMs (AAAI 2025 · similarity 0.88)
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