Research map / Probabilistic and scientific modeling / Causal discovery
Root Cause Analysis of Outliers with Missing Structural Knowledge
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Proposes SMOOTH TRAVERSAL and SCORE ORDERING, two RCA methods that use only marginal information-theoretic anomaly scores from a single anomalous sample, with probabilistic guarantees for polytree causal graphs.
Problem
Root cause analysis of a single anomalous sample when the post-intervention distribution is unknown or only one sample is available, and conditional probability estimation is statistically ill-posed.
Approach
Defines information-theoretic (IT) anomaly scores as negative log tail probabilities, shows that score jumps along causal paths are bounded (anomalies rarely cause much larger anomalies), and uses marginal score differences with a known DAG (smooth traversal) or top-scoring anomalies without a DAG (score ordering) to find the root cause with guarantees in polytrees.
Key results
- On synthetic data, SMOOTH TRAVERSAL, Traversal and Counterfactual are the strongest methods and outperform SCORE ORDERING across anomaly strengths 2.0 to 3.0.
- SMOOTH TRAVERSAL and Traversal are the fastest methods in runtime scaling experiments.
- On real-world and semi-synthetic data, SCORE ORDERING often performs well but both proposed methods are sometimes outperformed by Cholesky, Circa or Counterfactual.
Measured effects reported in the paper
| What was changed | Where | Measured | Effect |
|---|---|---|---|
| Use Smooth Traversal (score-difference traversal, requires causal graph) instead of threshold-based traversal | Root cause analysis with known DAG · Synthetic random DAGs | top-1 recall | No clear effect |
| Use Score Ordering (top-scoring marginal anomalies, no causal graph) instead of graph-based methods | Root cause analysis without known DAG · Synthetic random DAGs | top-1 recall | Hurt |
| Use Score Ordering instead of graph-based methods | Root cause analysis without known DAG · Real-world and semi-synthetic data | top-1 recall | Mixed |
| Increase anomaly strength injected at root cause (2.0 to 3.0) | Score Ordering · Synthetic random DAGs | top-1 recall | Helped |
| Increase graph size from 20 to 100 nodes | Score Ordering, Cholesky, Circa · Synthetic random DAGs, x=3 | top-1 recall | Hurt |
| Increase graph size from 20 to 100 nodes | Smooth Traversal, Traversal, Counterfactual · Synthetic random DAGs, x=3 | top-1 recall | No clear effect |
| Graph misspecification (random edge additions/removals/reversals) on n=50, x=3 | Smooth Traversal vs Circa · Synthetic random DAGs | top-1 recall | Hurt |
| Graph misspecification (random edge additions/removals/reversals) on n=50, x=3 | Smooth Traversal · Synthetic random DAGs | top-1 recall | No clear effect |
Surprising findings
- SCORE ORDERING performance improves slightly as anomaly strength increases while other approaches stay roughly constant.
- Circa and Cholesky perform considerably worse on synthetic data, apparently due to the linearity assumption.
Limitations
- Guarantees are proven only for polytree causal graphs with a single root cause; the main experiments include general DAGs where guarantees may not hold.
- Score typicality assumption is needed for the main bounds, holding only approximately for random samples in general.
- SCORE ORDERING performance decays as graph size grows, and it is weaker than traversal-based methods on synthetic data.
Experimental setup
Datasets: PetShop Sock-shop 2 ProRCA semi-synthetic datasets
Benchmarks: PetShop Sock-shop 2 ProRCA semi-synthetic
Metrics: top-1 recall true positive rate runtime
Baselines: Cholesky Traversal Circa Counterfactual RCD epsilon-Diagnosis
Builds on: Budhathoki et al. contribution analysis (Shapley-based RCA) traversal-based RCA Cholesky-based RCA Circa Fisher's method Tippett's method
Closest papers by meaning
- Root Cause Analysis of Measurement and Mechanistic Anomalies (NeurIPS 2026 · similarity 0.92)
- Robust Root Cause Diagnosis using In-Distribution Interventions (ICLR 2025 · similarity 0.86)
- Where Root Cause Analysis Fails: A Retrieval-Reranking Decomposition (NeurIPS 2026 · similarity 0.86)
- PRIM: Meta-Learned Bayesian Root Cause Analysis (NeurIPS 2026 · similarity 0.85)
- Local Identifying Causal Relations in the Presence of Latent Variables (ICML 2025 · similarity 0.85)
- Identification of Causal Structure in the Presence of Missing Data with Additive Noise Model (AAAI 2024 · similarity 0.84)
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