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Spectral Convolutional Conditional Neural Process

NeurIPS 2025 · Probabilistic and scientific modeling › Differential equations and PDEs · approach: Physics-informed operator learning

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Proposes SConvCNP, a convolutional neural process whose decoder uses FNO-style global spectral convolutions in the frequency domain instead of local CNN kernels, and evaluates it on synthetic 1-D, Lotka-Volterra, traffic-flow and image-completion regression.

Problem

Convolutional conditional neural processes (ConvCNPs) use local kernels with small receptive fields, so they struggle to aggregate information from sparse observations across large domains; enlarging kernels is costly, and transformer NPs scale quadratically.

Approach

Replace the ConvCNP's U-Net decoder with a U-shaped Fourier neural operator that parameterizes convolution kernels directly over a finite set of Fourier modes, giving global receptive fields at near-linear cost in grid size.

Key results

Measured effects reported in the paper

What was changedWhereMeasuredEffect
Replace the ConvCNP U-Net backbone with a U-shaped FNO backboneConvCNP · Sawtoothlog-likelihood: 0.10_{\pm0.30} -> 0.82_{\pm0.03}Helped
Replace the ConvCNP U-Net backbone with a U-shaped FNO backboneConvCNP · SawtoothRMSE: 0.40_{\pm0.06} -> 0.24_{\pm0.00}Helped
Replace the ConvCNP U-Net backbone with a U-shaped FNO backboneConvCNP · Periodiclog-likelihood: -0.73_{\pm0.01} -> -0.66_{\pm0.00}Hurt
Replace the ConvCNP U-Net backbone with a U-shaped FNO backboneConvCNP · California traffic flowlog-likelihood: 1.98_{\pm0.02} -> 2.05_{\pm0.02}Helped
Add positional encodings to the functional embedding (ablation)SConvCNP · Experiments (setting not specified)predictive accuracyHelped

Surprising findings

Limitations

Experimental setup

Datasets: GP Matern-5/2 synthetic GP periodic synthetic sawtooth synthetic square-wave synthetic stochastic Lotka-Volterra simulations LargeST California traffic flow DTD

Benchmarks: Matern-5/2 GP periodic GP sawtooth square wave Lotka-Volterra LargeST California traffic flow DTD image completion

Metrics: log-likelihood RMSE

Baselines: CNP AttCNP TNP TE-TNP ConvCNP

Builds on: ConvCNP Fourier neural operator conditional neural process TE-TNP

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