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Walking the Tightrope: Autonomous Disentangling Beneficial and Detrimental Drifts in Non-Stationary Custom-Tuning

NeurIPS 2025 · Large language models › Instruction and fine-tuning · approach: Fine-tuning for reasoning data · 1 citations (OpenAlex)

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Proposes Counterfactual Preference Optimization (CPO), a DPO-style RFT method that uses concept-graph-guided LLM counterfactual CoTs as negatives to disentangle detrimental concept drift in chest X-ray diagnosis with Qwen2.5-VL-7B, and releases the 320K-trajectory CXR-CounterFact dataset.

Problem

Detrimental concept drift in chain-of-thought reasoning during non-stationary reinforcement fine-tuning of MLLMs, which biases final diagnostic predictions in chest radiograph analysis.

Approach

Builds a hierarchical disease-attribute concept graph with association, irrelevance, and exclusion relations, uses it to prompt an LLM expert (Med-PaLM) to generate counterfactual diagnostic reasoning as negative samples, and optimizes a DPO-style counterfactual preference loss contrasting radiologist reports against these counterfactuals.

Key results

Measured effects reported in the paper

What was changedWhereMeasuredEffect
Apply CPO instead of SFTQwen2.5-VL (7B) · MS-CXR-TTop-1 accuracy (Avg.): 73.8 -> 81.8Helped
Apply CPO instead of SFTQwen2.5-VL (7B) · MS-CXR-T, Con.Top-1 accuracy: 54.9 -> 77.7Helped
Apply CPO instead of SFTQwen2.5-VL (7B) · MS-CXR-T, Pna.Top-1 accuracy: 70.0 -> 87.4Helped
Apply CPO instead of SFTQwen2.5-VL (7B) · MS-CXR-T, Pnx.Top-1 accuracy: 95.9 -> 95.8Hurt
Apply CPO instead of SFTQwen2.5-VL (7B) · MS-CXR-T, Ede.Top-1 accuracy: 77.1 -> 75.3Hurt
Use CPO instead of the strongest baseline per metricChest X-ray report generation · MIMIC-CXRBLEU-4: 0.133 -> 0.155Helped
Use CPO instead of the strongest baseline per metricChest X-ray report generation · MIMIC-CXRROUGE-L: 0.291 -> 0.321Helped
Use CPO instead of the strongest baseline per metricChest X-ray report generation · MIMIC-CXRMETEOR: 0.175 -> 0.236Helped
Use CPO instead of the strongest baseline per metricChest X-ray report generation · MIMIC-CXRCIDEr: 0.362 -> 0.375Helped
Use CPO instead of CARZeroZero-shot disease classification · Open-I, PadChest, PadChest20, ChestXray14, ChestXpert, ChestXDet10AUC: 83.8 -> 84.4; 81.0 -> 82.0; 83.7 -> 85.1; 81.1 -> 81.7; 92.3 -> 92.5; 79.6 -> 80.1Helped
Add CoT to RFT without CPO (ablation)Qwen2.5-VL (7B) · MS-CXR-TTop-1 accuracy (Avg.): 73.8 -> 74.9Helped
Add CPO to RFT without CoT (ablation)Qwen2.5-VL (7B) · MS-CXR-TTop-1 accuracy (Avg.): 73.8 -> 78.3Helped

Surprising findings

Limitations

Experimental setup

Datasets: MIMIC-CXR CXR-CounterFact (CCF) MS-CXR-T Open-I PadChest PadChest20 ChestXray14 CheXpert ChestXDet10

Benchmarks: MS-CXR-T MIMIC-CXR report generation Open-I PadChest PadChest20 ChestXray14 CheXpert ChestXDet10

Metrics: top-1 accuracy BLEU-1/2/3/4 ROUGE-L METEOR CIDEr AUC

Baselines: CTrans CheXRelNet BioViL BioViL-T Med-ST TempA-VLP CoCa-CXR R2Gen METransformer R2GenGPT MambaXray CARZero

Builds on: DPO Qwen2.5-VL Visual-RFT GRPO Med-PaLM

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