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FuseMoE: Mixture-of-Experts Transformers for Fleximodal Fusion

NeurIPS 2024 · Vision-language and multimodal › Cross-modal learning · approach: Multimodal fusion with missing modalities · 43 citations (OpenAlex)

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Proposes FuseMoE, a mixture-of-experts fusion transformer with a Laplace gating function for flexible multimodal EHR and other data with missing modalities and irregular sampling, backed by a convergence analysis of Laplace vs softmax gating.

Problem

Multimodal fusion struggles with a variable number of modalities, missing modalities, and irregularly sampled time series, especially in clinical EHR data.

Approach

Sparsely gated MoE fusion layer with per-modality routers, learnable missing-modality embeddings, an entropy regularizer for expert balance, mTAND-based irregularity encoding, and a Laplace (negative L2-distance) gating function claimed to give better parameter estimation rates than softmax gating.

Key results

Measured effects reported in the paper

What was changedWhereMeasuredEffect
use Laplace rather than Softmax gating (ablation)FuseMoE · MIMIC-IV 25-PHEAUROC: 70.54 $\pm$ 0.47 -> 71.23 $\pm$ 0.53Helped
use Laplace rather than Softmax gating (ablation)MoE · CMU-MOSIMAE: 0.69 $\pm$ 0.01 -> 0.65 $\pm$ 0.04Helped
use per-modality routers instead of a joint router (ablation)FuseMoE · CMU-MOSIAcc-2: 87.28 $\pm$ 0.35 -> 88.23 $\pm$ 0.57Helped
use per-modality routers instead of a joint router (ablation)FuseMoE · CMU-MOSEIAcc-2: 86.41 $\pm$ 0.36 -> 86.12 $\pm$ 0.19Mixed
add CXR to Vital & Notes (ablation)FuseMoE with Laplace gating · MIMIC-IV 48-IHMAUROC: 81.03 $\pm$ 0.25 -> 83.87 $\pm$ 0.33Helped
add CXR to Vital & Notes (ablation)FuseMoE with Laplace gating · MIMIC-IV LOSAUROC: 82.91 $\pm$ 1.02 -> 83.51 $\pm$ 0.51Helped
add CXR to Vital & Notes (ablation)FuseMoE with Laplace gating · MIMIC-IV 25-PHEAUROC: 71.23 $\pm$ 0.53 -> 73.65 $\pm$ 0.39Helped
add ECG to Vital & Notes & CXR (ablation)FuseMoE with Laplace gating · MIMIC-IV 48-IHMAUROC: 83.87 $\pm$ 0.33 -> 83.55 $\pm$ 0.49Hurt
add ECG to Vital & Notes & CXR (ablation)FuseMoE with Laplace gating · MIMIC-IV LOSAUROC: 83.51 $\pm$ 0.51 -> 83.58 $\pm$ 0.78No clear effect
add ECG to Vital & Notes & CXR (ablation)FuseMoE with Laplace gating · MIMIC-IV 25-PHEAUROC: 73.65 $\pm$ 0.39 -> 73.67 $\pm$ 0.71No clear effect
use per-modality or disjoint routers with entropy regularization instead of a joint router with importance loss (ablation)FuseMoE on patients with missing modalities · MIMIC-IV 48-IHM and LOSperformanceHelped

Surprising findings

Limitations

Experimental setup

Datasets: MIMIC-III MIMIC-IV CMU-MOSI CMU-MOSEI PAM CIFAR-10

Benchmarks: MIMIC-IV 48-IHM MIMIC-IV LOS MIMIC-IV 25-PHE CMU-MOSI CMU-MOSEI PAM CIFAR-10

Metrics: AUROC F1 MAE Acc-2 Corr accuracy

Baselines: TFN MulT MAG HAIM MISTS Softmax-MoE GRU-D SeFT IP-Net Transformer

Builds on: sparsely gated mixture of experts multi-time attention (mTAND) Vision-MoE HAIM

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