Research map / Probabilistic and scientific modeling / Dynamical systems
Extracting computational mechanisms from neural data using low-rank RNNs
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Measured effects reported in the paper
| What was changed | Where | Measured | Effect |
|---|---|---|---|
| fit low-rank RNN with LINT instead of truncating SVD of the full-rank connectivity | full-rank RNN trained on CDM · CDM trajectory similarity | trajectory fit: rank 1 vs rank 4 or 5 for comparable accuracy | Helped |
| fit low-rank RNN with LINT instead of truncating SVD | full-rank RNN trained on DMS · DMS trajectory similarity | trajectory fit | Helped |
| increase rank of inferred lrRNN beyond 1 (CDM) or 2 (DMS) (ablation) | LINT · CDM and DMS full-rank fits | goodness of fit | No clear effect |
| increase rank of inferred network on monkey recordings (ablation) | LINT · monkey A and F recordings | R2 | No clear effect |
| constrain fitted network to rank one instead of full rank, when subsampling neurons (ablation) | LINT on CDM full-rank network · subsampled neurons | trajectory similarity | Mixed |
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