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HyperFast: Instant Classification for Tabular Data

AAAI 2024 · Architectures and efficiency › Pruning and efficient tuning · approach: Low-rank compression and merging · 15 citations (OpenAlex)

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Introduces HyperFast, a meta-trained hypernetwork that generates the weights of a small MLP for an unseen tabular dataset in a single forward pass, enabling instant classification without training.

Problem

Training and hyperparameter tuning of classifiers on tabular data is computationally expensive and slow, while existing pre-trained tabular approaches such as TabPFN are limited to small datasets (≤1000 training examples, 100 features, 10 classes).

Approach

A hypernetwork is meta-trained across many datasets; given a labeled support set, it uses random features, PCA, shared MLP modules, pooling over support samples, and nearest-neighbor biases to directly predict all weights of a main MLP, which then classifies query points in one forward pass.

Key results

Measured effects reported in the paper

What was changedWhereMeasuredEffect
add random features (RF) (ablation)HyperFast · HyperFast ablationbalanced accuracy (%): 75.387 -> 81.496Helped
add random features and PCA (ablation)HyperFast · HyperFast ablationbalanced accuracy (%): 73.704 -> 81.496Helped
use 512 PCs instead of 784 PCs (ablation)HyperFast · HyperFast ablationbalanced accuracy (%): 81.496 -> 81.347No clear effect
use 256 PCs instead of 784 PCs (ablation)HyperFast · HyperFast ablationbalanced accuracy (%): 81.496 -> 81.235No clear effect
reduce RF dimensionality to 16,384 (ablation)HyperFast · HyperFast ablationbalanced accuracy (%): 81.496 -> 81.059No clear effect
concatenate PCA representations to hypernetwork module inputs (ablation)HyperFast · HyperFast ablationbalanced accuracy (%): 80.727 -> 81.496Helped
use 2 shared-module layers instead of 1 (ablation)HyperFast · HyperFast ablationbalanced accuracy (%): 80.790 -> 81.496Helped
add a residual connection in hypernetwork L (ablation)HyperFast · HyperFast ablationbalanced accuracy (%): 77.835 -> 81.496Helped
add a residual connection in the main model (ablation)HyperFast · HyperFast ablationbalanced accuracy (%): 80.318 -> 81.496Helped
add NN bias based on PCA features (ablation)HyperFast · HyperFast ablationbalanced accuracy (%): 81.305 -> 81.496Helped
add NN bias based on intermediate activations (ablation)HyperFast · HyperFast ablationbalanced accuracy (%): 80.703 -> 81.496Helped
add NN biases (ablation)HyperFast · HyperFast ablationbalanced accuracy (%): 79.714 -> 81.496Helped

Surprising findings

Limitations

Experimental setup

Datasets: OpenML-CC18 Dogs genomics UK Biobank HapMap3

Benchmarks: OpenML-CC18 meta-test subset HapMap3 subpopulation prediction UK Biobank phenotype prediction

Metrics: balanced accuracy average rank runtime

Baselines: XGBoost LightGBM CatBoost Auto-Sklearn 2.0 AutoGluon SAINT TabPFN NODE FT-Transformer T2G-Former DANet Net-DNF

Builds on: hypernetworks TabPFN Deep Sets random features Prototypical Networks

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