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A Debiased MDI Feature Importance Measure for Random Forests

NeurIPS 2019 · Learning theory and algorithms › Prediction and decision losses · approach: Tree ensemble optimization · 80 citations (OpenAlex)

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Measured effects reported in the paper

What was changedWhereMeasuredEffect
Evaluate feature contributions on out-of-bag samples rather than the tree's training samplesMDI feature importance · Simulated classification, deep treesAUC: 0.12 -> 0.76Helped
Evaluate feature contributions on out-of-bag samples rather than the tree's training samplesMDI feature importance · Simulated regression, deep treesAUC: 0.09 -> 0.52Helped
Evaluate feature contributions on out-of-bag samples rather than the tree's training samplesMDI feature importance · ChIP classification, deep treesAUC: 0.60 -> 0.87Helped
Evaluate feature contributions on out-of-bag samples rather than the tree's training samplesMDI feature importance · ChIP regression, deep treesAUC: 0.71 -> 0.98Helped
Increase minimum leaf size from 1 to 100 (ablation)MDI-oob · Simulated classificationAUC: 0.76 -> 0.75Hurt
Increase minimum leaf size from 1 to 100 (ablation)MDI-oob · Simulated regressionAUC: 0.52 -> 0.58Helped
Increase minimum leaf size from 1 to 100 (ablation)MDI-oob · ChIP classificationAUC: 0.87 -> 0.94Helped
Increase minimum leaf size from 1 to 100 (ablation)MDI-oob · ChIP regressionAUC: 0.98 -> 0.98No clear effect
Use UFI instead of MDI-oobRandom Forest feature selection · Simulated regression, deep treesAUC: 0.52 -> 0.54Helped
Use UFI instead of MDI-oobRandom Forest feature selection · ChIP classification, deep treesAUC: 0.87 -> 0.88Helped
Use UFI instead of MDI-oobRandom Forest feature selection · ChIP regression, deep treesAUC: 0.98 -> 0.99Helped

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