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Information Constraints on Auto-Encoding Variational Bayes

NeurIPS 2018 · Probabilistic and scientific modeling › Variational and generative sampling · approach: Structured latent VAEs · 93 citations (OpenAlex)

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Measured effects reported in the paper

What was changedWhereMeasuredEffect
Penalize dependence between the biological latent representation and quality-control nuisance metrics with dHSICscVI · PBMCIDR reproducible correlation: 0.26~$\pm$~0.07 -> 0.43~$\pm$~0.02Helped
Penalize dependence between the biological latent representation and quality-control nuisance metrics with dHSICscVI · PBMCquality control metrics coefficient of determination (linear regression): 0.195 -> 0.176Helped
Penalize dependence between the biological latent representation and quality-control nuisance metrics with dHSICscVI · PBMCquality control metrics coefficient of determination (random forest): 0.129 -> 0.123Helped
Penalize dependence between the biological latent representation and quality-control nuisance metrics with dHSICscVI · PBMCIDR mixture weight: 0.213~$\pm$~0.001 -> 0.217~$\pm$~0.003No clear effect
Use HSIC-constrained representation learning with lighting direction as a continuous nuisance variableVAE · Extended Yale Bperson identity accuracy: 0.72 -> 0.75Helped
Use HSIC-constrained representation learning with lighting direction as a continuous nuisance variableVAE · Extended Yale Blighting direction average error in degrees (linear regression): 9.40 -> 28.04Mixed
Use HSIC-constrained representation learning with lighting direction as a continuous nuisance variableVAE · Extended Yale Blighting group average classification error (logistic regression): 0.11 -> 0.29Mixed
Use HSIC-constrained representation learning with lighting direction as a continuous nuisance variableVAE · Extended Yale Blighting group average classification error (random forest): 0.26 -> 0.52Mixed
Use HSIC-constrained representation learning with lighting direction as a continuous nuisance variableVAE · Extended Yale Blighting direction average error in degrees (random forest): 14.07 -> 36.15Mixed

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