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DeepBranchTracer: A Generally-Applicable Approach to Curvilinear Structure Reconstruction Using Multi-Feature Learning
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Introduces DeepBranchTracer, a U-Net-based network (CSFL) predicting centerline, boundary, direction and radius maps plus a multi-feature iterative tracing strategy (MFT) for 2D and 3D curvilinear structure reconstruction.
Problem
Reconstructing curvilinear structures (roads, vessels, neuron branches) from images is hard due to complex topology, adjacent/tangled branches and ambiguous evidence; segmentation methods merge adjacent branches and reconstruction methods rely on hand-crafted geometric models.
Approach
Formulates curvilinear extraction as geometric attribute estimation (direction, radius) learned by a deep network with LSTM sequence modules, combined with centerline and boundary image features in an iterative local tracing procedure that needs no hand-crafted tubular/ray models.
Key results
- On fMOST-VTA, DBT reaches SSD-F1 0.910 and Length-F1 0.911, versus 0.901 SSD-F1 for neuTube+V-Net and 0.759 for SPE.
- On DRIVE, DBT achieves SSD-F1 0.893 vs. 0.857 for the best segmentation baseline (FR-Net), but with lower precision (0.827).
- On the Massachusetts Roads dataset, DBT reaches Length-F1 0.816 and ABL 200.2, above the best segmentation baseline Length-F1 0.803 (V-Net).
Measured effects reported in the paper
| What was changed | Where | Measured | Effect |
|---|---|---|---|
| Add geometric features to centerline-only tracing (ablation) | DeepBranchTracer on fMOST-VTA · fMOST-VTA | ABL: 128.65 -> 167.51 | Helped |
| Add the LSTM sequence learning module to geometric-only tracing (ablation) | DeepBranchTracer on fMOST-VTA · fMOST-VTA | ABL: 48.07 -> 57.04 | Helped |
| Add image and geometric features with LSTM instead of centerline features only (ablation) | DeepBranchTracer on fMOST-VTA · fMOST-VTA | SSD-F1: 0.845 -> 0.910 | Helped |
| Use centerline-only tracing instead of geometric-only tracing (ablation) | DeepBranchTracer on fMOST-VTA · fMOST-VTA | PE: 1.879 -> 0.835 | Helped |
| Add geometry features to centerline-only tracing without LSTM (ablation) | DeepBranchTracer on fMOST-VTA · fMOST-VTA | Length-F1: 0.893 -> 0.890 | No clear effect |
| Use DeepBranchTracer rather than V-Net | Curvilinear structure reconstruction · Massachusetts Roads Dataset | Length-F1: 0.803 -> 0.816 | Helped |
| Use DeepBranchTracer rather than FR-Net | Curvilinear structure reconstruction · DRIVE | SSD-F1: 0.857 -> 0.893 | Helped |
| Use DeepBranchTracer rather than FR-Net | Curvilinear structure reconstruction · DRIVE | Length-F1: 0.831 -> 0.828 | Hurt |
| Use DeepBranchTracer rather than FR-Net | Curvilinear structure reconstruction · CHASE_DB1 | Length-F1: 0.829 -> 0.845 | Helped |
| Use DeepBranchTracer rather than neuTube+V-Net | Curvilinear structure reconstruction · fMOST-VTA | ABL: 216.3 -> 198.3 | Hurt |
| Use DeepBranchTracer rather than SPE | Curvilinear structure reconstruction · DIADEM-CCF | SSD-F1: 0.379 -> 0.421 | Helped |
Surprising findings
- DBT has the highest recall but low precision on vessel datasets, which the authors attribute to increased tolerance of false positives.
- Segmentation baseline neuTube+V-Net achieves higher ABL (216.3) than DBT (198.3) on fMOST-VTA.
Limitations
- Precision is low on vessel datasets (DRIVE 0.827, CHASE_DB1 0.827) due to false positives.
- Relies on fixed thresholds T_c and T_b and tracing hyperparameters tuned per setup.
- Training is split into stages (backbone/centerline/boundary first, then direction/radius blocks frozen parts), adding pipeline complexity.
Experimental setup
Datasets: Massachusetts Roads Dataset DRIVE CHASE_DB1 DIADEM-CCF fMOST-VTA
Benchmarks: Massachusetts Roads Dataset DRIVE CHASE_DB1 fMOST-VTA DIADEM-CCF
Metrics: SSD-F1 Precision Recall Length-F1 ABL PE RE
Baselines: U-Net V-Net AU-Net CS-Net RCNN-UNet SGCN RoadTracer Vec-road FR-Net SA-Net neuTube MOST
Builds on: U-Net RoadTracer SPE
Closest papers by meaning
- Beyond the Pixel-Wise Loss for Topology-Aware Delineation (CVPR 2018 · similarity 0.86)
- Dual-level Adapter Boosting Prompt-free Curvilinear Structure Segmentation (CVPR 2026 · similarity 0.85)
- Leveraging 3D Geometric Priors in 2D Rotation Symmetry Detection (CVPR 2025 · similarity 0.83)
- VGGSfM: Visual Geometry Grounded Deep Structure From Motion (CVPR 2024 · similarity 0.82)
- VGGT: Visual Geometry Grounded Transformer (CVPR 2025 · similarity 0.82)
- STAR-Edge: Structure-aware Local Spherical Curve Representation for Thin-walled Edge Extraction from Unstructured Point Clouds (CVPR 2025 · similarity 0.81)
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