Research map / Detection and segmentation / Open-set and few-shot detection
Automated scalable segmentation of neurons from multispectral images
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Measured effects reported in the paper
| What was changed | Where | Measured | Effect |
|---|---|---|---|
| increase number of imaging color channels from 3 to 5 (simulated data) (ablation) | Supervoxel clustering pipeline · Simulated Brainbow, 9 neurons | adjusted Rand index | Helped |
| increase neuron-color noise sigma1 in the reported range (ablation) | Pipeline on simulated data · Simulated Brainbow | adjusted Rand index | Hurt |
| overestimate neuron count in clustering (ablation) | Clustering step · Simulated Brainbow, 9 neurons | adjusted Rand index | No clear effect |
| underestimate neuron count in clustering (ablation) | Clustering step · Simulated Brainbow, 9 neurons | adjusted Rand index | Hurt |
| supervoxel merging routine (reduces supervoxel count) (ablation) | Supervoxel representation · Real hippocampus Brainbow 1020x1020x225 | supervoxel count: 62000 to 39000 supervoxels | Helped |
| aggressive supervoxel merging vs conservative merging (ablation) | Supervoxel merging · Simulated Brainbow | segmentation quality | Hurt |
| denoise image stack with BM4D collaborative filtering | Brainbow images · Real Brainbow patches | color noise / edge preservation (qualitative) | Helped |
Closest papers by meaning
- Efficient Connectivity-Preserving Instance Segmentation with Supervoxel-Based Loss Function (AAAI 2025 · similarity 0.89)
- FISBe: A Real-World Benchmark Dataset for Instance Segmentation of Long-Range Thin Filamentous Structures (CVPR 2024 · similarity 0.85)
- SCCS: Deep Neural Spectral Clustering for Self-Supervised Subcellular Structure Segmentation (AAAI 2025 · similarity 0.85)
- Learning Multimodal Volumetric Features for Large-Scale Neuron Tracing (AAAI 2024 · similarity 0.84)
- Cross-Dimension Affinity Distillation for 3D EM Neuron Segmentation (CVPR 2024 · similarity 0.83)
- A Computational Framework for Modeling Emergence of Color Vision in the Human Brain (ICLR 2025 · similarity 0.82)
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