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EAGLES: Towards Effective, Efficient, and Economical Federated Graph Learning via Unified Sparsification

ICML 2025 · Graph learning › Graph self-supervised learning · approach: Heterophily and imbalance on graphs

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Proposes EAGLES, a unified graph-plus-parameter sparsification framework for federated graph learning that uses consensus-based parameter masks, a dual-expert graph sparsifier, and OT-based structure-similarity aggregation to cut training FLOPS and communication.

Problem

Federated graph learning incurs high computational and communication costs as graphs grow and GNNs deepen; existing sparsification methods address only graph or only parameter space and ignore client heterogeneity.

Approach

Jointly sparsify graph structure (via multiple sparsification experts combined by a hard-concrete-gated synergy expert) and model parameters (via client-consensus dynamic threshold masks with rollback), and weight client aggregation by optimal-transport distances between gating-derived structural representations.

Key results

Measured effects reported in the paper

What was changedWhereMeasuredEffect
Use EAGLES unified graph and parameter sparsification instead of FedAvgGCN · PubmedTop-1 accuracy: 85.65 -> 86.97Helped
Use EAGLES unified graph and parameter sparsification instead of FedAvgGraphSAGE · Ogbn-ArxivTop-1 accuracy: 63.99 -> 65.37Helped
Use EAGLES unified graph and parameter sparsification instead of FedAvgDeeperGCN · Ogbn-ProteinsROC-AUC: 81.54 -> 82.10Helped
Use EAGLES unified graph and parameter sparsification instead of FedAvgGCN · PubmedMax training FLOPS: 1x -> 0.48xHelped
Use EAGLES unified graph and parameter sparsification instead of FedAvgGraphSAGE · Ogbn-ArxivMax training FLOPS: 1x -> 0.32xHelped
Use EAGLES unified graph and parameter sparsification instead of FedAvgDeeperGCN · Ogbn-ProteinsMax training FLOPS: 1x -> 0.18xHelped
Use EAGLES unified graph and parameter sparsification instead of FedAvgGCN · PubmedCommunication bytes: 1x -> 0.37xHelped
Use EAGLES unified graph and parameter sparsification instead of FedAvgGraphSAGE · Ogbn-ArxivCommunication bytes: 1x -> 0.48xHelped
Use EAGLES unified graph and parameter sparsification instead of FedAvgDeeperGCN · Ogbn-ProteinsCommunication bytes: 1x -> 0.20xHelped
Set parameter sparsification rate to 81.79% (ablation)EAGLES · Ogbn-ProteinsTop-1 accuracy: +0.4%Helped
Set graph sparsification rate to approximately 30% (ablation)EAGLES · Multiple datasetsTop-1 accuracyMixed
Increase weight sparsity (ablation)EAGLES · Ogbn-Arxiv and Ogbn-ProteinsMax training FLOPSHelped

Surprising findings

Limitations

Experimental setup

Datasets: Cora Pubmed Photo Ogbn-Arxiv Ogbn-Proteins Ogbn-Products

Benchmarks: Cora Pubmed Photo Ogbn-Arxiv Ogbn-Proteins Ogbn-Products

Metrics: Top-1 accuracy ROC-AUC max training FLOPS communication bytes

Baselines: FedAvg FedProx FedSage+ APPLE FedCP FedTAD FedSSP FGGP FedGTA PruneFL FedTiny FedDIP

Builds on: lottery ticket hypothesis straight-through estimator hard concrete distribution DSpar ACE-GLT

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