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Learning Hidden Markov Models When the Locations of Missing Observations are Unknown

ICML 2023 · Probabilistic and scientific modeling › Molecules and proteins · approach: Neuro-symbolic probabilistic layers · 0 citations (OpenAlex)

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Measured effects reported in the paper

What was changedWhereMeasuredEffect
Use HMMOP inference rather than naive prediction on observations with unknown gapsSequence labeling with HMMOP · Synthetic Degree 5, STD 0.5accuracy: .66(.15) -> .73(.14)Helped
Use HMMOP inference rather than naive prediction on observations with unknown gapsSequence labeling with HMMOP · Synthetic Degree 5, STD 0.75accuracy: .52(.17) -> .59(.14)Helped
Use HMMOP inference rather than naive prediction on observations with unknown gapsSequence labeling with HMMOP · Synthetic Degree 5, STD 1.0accuracy: .49(.18) -> .50(.17)No clear effect
Use HMMOP inference rather than naive prediction on observations with unknown gapsSequence labeling with HMMOP · Synthetic Degree 3, STD 0.5accuracy: .80(.21) -> .84(.16)Helped
Use HMMOP inference rather than naive prediction on observations with unknown gapsSequence labeling with HMMOP · Synthetic Degree 3, STD 0.75accuracy: .49(.18) -> .73(.15)Helped
Use HMMOP inference rather than naive prediction on observations with unknown gapsSequence labeling with HMMOP · Synthetic Degree 3, STD 1.0accuracy: .38(5.6) -> .45(5.6)Helped
Use HMMOP inference rather than naive prediction on observations with unknown gapsSequence labeling with HMMOP · Multi-Partite, STD 0.5accuracy: .69(.16) -> .72(.16)Helped
Use HMMOP inference rather than naive prediction on observations with unknown gapsSequence labeling with HMMOP · Multi-Partite, STD 1.0accuracy: .48(.18) -> .50(.16)Helped
Use HMMOP inference rather than naive prediction on observations with unknown gapsSequence labeling with HMMOP · Multi-Partite, STD 1.5accuracy: .40(.17) -> .40(.15)No clear effect
Use HMMOP inference rather than naive prediction on observations with unknown gapsSequence labeling with HMMOP · POSaccuracy: .88(.11) -> .89(.12)No clear effect
Use sampling imputation rather than random imputation for unknown omission probabilitiesMatching Sampler · Synthetic and semi-synthetic benchmarksL1 transition-matrix distanceHelped
Use the Gaps Sampler rather than the Naive reconstructionHMM reconstruction with unknown gaps · Correctly specified synthetic and semi-synthetic benchmarksL1 transition-matrix distanceHelped

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