Research map / Probabilistic and scientific modeling / Dynamical systems
Variational Mixtures of ODEs for Inferring Cellular Gene Expression Dynamics
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Measured effects reported in the paper
| What was changed | Where | Measured | Effect |
|---|---|---|---|
| replace fixed transcription rates with cell-state-dependent transcription rates (ablation) | VeloVAE · PE | MSE: 6.815 -> 0.823 | Helped |
| replace fixed transcription rates with cell-state-dependent transcription rates (ablation) | VeloVAE · DG1 | MSE: 0.574 -> 0.243 | Helped |
| replace fixed transcription rates with cell-state-dependent transcription rates (ablation) | VeloVAE · MB1 | MSE: 10.431 -> 1.886 | Helped |
| replace fixed transcription rates with cell-state-dependent transcription rates (ablation) | VeloVAE · ET | MSE: 0.246 -> 0.151 | Helped |
| replace fixed transcription rates with cell-state-dependent transcription rates (ablation) | VeloVAE · DG2 | MSE: 0.968 -> 0.159 | Helped |
| replace fixed transcription rates with cell-state-dependent transcription rates (ablation) | VeloVAE · MB2 | MSE: 2.295 -> 0.152 | Helped |
| use an informative capture-time prior rather than an uninformative prior | VeloVAE · ET | time correlation: 0.622 -> 0.855 | Helped |
| use an informative capture-time prior rather than an uninformative prior | VeloVAE · DG2 | time correlation: 0.529 -> 0.707 | Helped |
| use an informative capture-time prior rather than an uninformative prior | VeloVAE · MB2 | time correlation: 0.870 -> 0.897 | Helped |
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