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Representation Learning on Graphs with Jumping Knowledge Networks

ICML 2018 · Graph learning › Graph self-supervised learning · approach: Semi-supervised node representation learning · 970 citations (OpenAlex)

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Measured effects reported in the paper

What was changedWhereMeasuredEffect
add JK layer aggregation with max-poolingGCN · Citeseeraccuracy: 77.3 (1.3) -> 77.7 (0.5)Helped
add JK layer aggregation with concatenationGCN · Citeseeraccuracy: 77.3 (1.3) -> 78.3 (0.8)Helped
add JK layer aggregation with max-poolingGCN · Coraaccuracy: 88.2 (0.7) -> 89.6 (0.5)Helped
add JK layer aggregation with concatenationGCN · Coraaccuracy: 88.2 (0.7) -> 89.1 (1.1)Helped
use LSTM-attention instead of max-pooling or concatenation for layer aggregation (ablation)GCN-based JK-Net · Citeseer and Coraaccuracy: 77.7 (0.5) -> 74.7 (0.9); 89.6 (0.5) -> 85.8 (1.0)Hurt
add JK layer aggregation to GraphSAGE using mean node aggregation and concatenationGraphSAGE · RedditMicro-F1: 0.950 -> 0.953Helped
use LSTM rather than concatenation for layer aggregation with mean node aggregation (ablation)GraphSAGE-based JK-Net · RedditMicro-F1: 0.953 -> 0.955Helped
use max-pooling rather than concatenation for layer aggregation with max-pooling node aggregation (ablation)GraphSAGE-based JK-Net · RedditMicro-F1: 0.924 -> 0.948Helped
use LSTM rather than concatenation for layer aggregation with max-pooling node aggregation (ablation)GraphSAGE-based JK-Net · RedditMicro-F1: 0.924 -> 0.877Hurt
add LSTM-attention layer aggregation to GraphSAGE with mean node aggregationGraphSAGE · PPI, 30 epochsMicro-F1: 0.690 -> 0.818Helped
replace concatenation with LSTM-attention layer aggregation (ablation)GAT-based JK-Net · PPIMicro-F1: 0.959 (0.003) -> 0.969 (0.006)Helped
add JK LSTM-attention aggregation to GATGAT · PPIMicro-F1: 0.968 (0.002) -> 0.969 (0.006)No clear effect

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