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Exploring the Interaction between Local and Global Latent Configurations for Clustering Single-Cell RNA-Seq: A Unified Perspective

AAAI 2023 · Label-efficient and robust learning › Recognition and long-tail · approach: Multilingual language representation pretraining · 3 citations (OpenAlex)

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Measured effects reported in the paper

What was changedWhereMeasuredEffect
Add the FR filtering mechanism and FD correction mechanism (ablation)scTPF · Muraro, Plasschaert, and YoungACC: 91.94 -> 95.76; 93.88 -> 97.46; 81.49 -> 84.48Helped
Add the FD correction mechanism (ablation)scTPF with FR filtering · Muraro, Plasschaert, and YoungACC: 93.78 -> 95.76; 97.09 -> 97.46; 82.04 -> 84.48Helped
Add the FR filtering mechanism (ablation)scTPF with FD correction · Muraro, Plasschaert, and YoungACC: 94.44 -> 95.76; 97.30 -> 97.46; 83.57 -> 84.48Helped
Combine probability-based F1 and topology-based F2 filtering (ablation)scTPF · Muraro, Plasschaert, QX LM, and YoungACC: 93.59 -> 95.76; 96.99 -> 97.46; 99.60 -> 99.71; 79.19 -> 84.48Helped
Combine global content correction T1 and local topology correction T2 (ablation)scTPF · Muraro, Plasschaert, QX LM, and YoungACC: 94.53 -> 95.76; 97.28 -> 97.46; 99.64 -> 99.71; 83.92 -> 84.48Helped
Use scTPF rather than scTAGscRNA-seq clustering · Eight datasets (average)NMI: 85.02 -> 92.93Helped
Use scTPF rather than scTAGscRNA-seq clustering · Eight datasets (average)ARI: 87.34 -> 94.06Helped

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