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PixelLM: Pixel Reasoning with Large Multimodal Model
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Rebuttal-style response for PixelLM, a large multimodal model that generates pixel-level masks via a lightweight pixel decoder and a segmentation codebook of special tokens, with added ablations on MUSE, LLaVA-Bench and discrete-token alternatives.
Problem
Generating pixel-level masks for image reasoning involving multiple open-world targets remains challenging for large multimodal models.
Approach
A lightweight pixel decoder plus a codebook of shared [SEG] tokens (N=6) that the LLM autoregressively generates; the hidden embeddings condition the decoder to produce masks for multiple targets, avoiding reliance on SAM.
Key results
- Training with MUSE raises LISA's ReasonSeg val gIoU from 52.9 to 58.0 and cIoU from 54.0 to 59.1.
- PixelLM with CLIP-H reaches 72.6 cIoU on refCOCOg and 47.8 cIoU on MUSE, improving over the default setting.
- Discrete coordinate tokens with 128 polygon points per mask perform worse than PixelLM across datasets (e.g., 59.1 vs 69.3 on refCOCOg).
Measured effects reported in the paper
| What was changed | Where | Measured | Effect |
|---|---|---|---|
| add MUSE training data to LISA (ablation) | LISA · ReasonSeg val | gIoU: 52.9 -> 58.0 | Helped |
| add MUSE training data to LISA (ablation) | LISA · ReasonSeg val | cIoU: 54.0 -> 59.1 | Helped |
| replace CLIP vision encoder with laion-CLIP-H (ablation) | PixelLM · refCOCOg / MrefCOCOg / MUSE | cIoU: 69.3->72.6 (refCOCOg), 65.8->68.0 (MrefCOCOg), 46.3->47.8 (MUSE) | Helped |
| predict 128 polygon points with discrete coordinate tokens instead of compact segmentation tokens (ablation) | PixelLM · refCOCOg / MrefCOCOg / MUSE | cIoU: 69.3->59.1 (refCOCOg), 65.8->46.8 (MrefCOCOg), 46.3->36.2 (MUSE) | Hurt |
| change loss weights (lambda_ref, lambda_dice) from default 2/0.5 to 1/1 or 0.5/2 (ablation) | PixelLM · refCOCOg / MrefCOCOg / MUSE | cIoU: 69.3->68.8/68.6 (refCOCOg) | Hurt |
| add MUSE text-only image-text data (no mask loss) to LLaVA training (ablation) | LLaVA · LLaVA-Bench All | score: 62.7 -> 63.1 | Helped |
| add MUSE data with segmentation mask/loss to LLaVA training (ablation) | LLaVA · LLaVA-Bench All | score: 62.7 -> 63.3 | Helped |
| train with segmentation decoder and mask targets (vs. text-only MUSE) (ablation) | LLaVA · LLaVA-Bench All | score: 63.1 -> 63.3 | Helped |
| use the 15k-sample MUSE‡ test set instead of MUSE val | PixelLM · MUSE | cIoU: 46.3 -> 45.9 | No clear effect |
| add a comprehensive segmentation codebook plus lightweight pixel decoder (vs. LISA SAM-based decoder) | PixelLM · refCOCO family | cIoU | Helped |
Surprising findings
- PixelLM scores lower than LLaVA on LLaVA-Bench (51.7 vs 62.7 All), attributed to the brief, simple text in segmentation datasets.
- Decoder alone without the codebook surpasses the SAM-based decoder in cIoU but trails slightly in gIoU.
Limitations
- Segmentation datasets used for training carry low-quality text, hurting general VL performance.
- Discrete-token mask generation was worse and long polygon sequences cause autoregressive errors; combining VQGAN-like tokens with LLMs is left open.
Experimental setup
Datasets: MUSE LLaVA-150k ReasonSeg refCOCO refCOCOg MrefCOCOg ade20k
Benchmarks: ReasonSeg refCOCOg MrefCOCOg MUSE LLaVA-Bench
Metrics: cIoU gIoU
Baselines: LISA UNINEXT Pix2Seq v2 VisionLLM LLaVA
Builds on: LISA SAM LLaVA Pix2Seq v2 VisionLLM
Closest papers by meaning
- SegAgent: Exploring Pixel Understanding Capabilities in MLLMs by Imitating Human Annotator Trajectories (CVPR 2025 · similarity 0.90)
- UniPixel: Unified Object Referring and Segmentation for Pixel-Level Visual Reasoning (NeurIPS 2025 · similarity 0.89)
- PixelCraft: A Multi-Agent system for High-Fidelity Visual Reasoning on Structured Images (ICLR 2026 · similarity 0.89)
- LISA: Reasoning Segmentation via Large Language Model (CVPR 2024 · similarity 0.88)
- MMR-Life: Piecing Together Real-life Scenes for Multimodal Multi-image Reasoning (ICLR 2026 · similarity 0.88)
- MLLM-For3D: Adapting Multimodal Large Language Model for 3D Reasoning Segmentation (NeurIPS 2025 · similarity 0.88)
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