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CycleINR: Cycle Implicit Neural Representation for Arbitrary-Scale Volumetric Super-Resolution of Medical Data
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Proposes CycleINR, an implicit neural representation model with local attention latent-code sampling and a cycle-consistent loss for arbitrary-scale volumetric super-resolution of anisotropic CT/MRI, and a new SNLI metric for inter-slice noise inconsistency.
Problem
Anisotropic medical 3D volumes have low inter-slice resolution; existing volumetric super-resolution methods are tied to fixed upsampling factors and generate over-smoothed, inter-slice-inconsistent slices.
Approach
Treat volumetric SR as implicit neural function approximation so one model samples arbitrary scales, add a local attention mechanism over latent-code grid sampling, and enforce a cycle-consistent L1 loss (HR generated from LR, then LR reconstructed from HR) to preserve noise level and reduce over-smoothing.
Key results
- At x5 scale, CycleINR reaches 35.00 PSNR versus 36.99 for SAINT, but lowers LPIPS alex to 0.0464 (vs 0.0996 for SAINT) and SNLI to 0.6050 (vs 1.6996 for SAINT).
- On the MSD liver tumor downstream segmentation at x5, CycleINR gets tumor DSC 0.6881 and NSD 0.5640, the best among compared methods on tumor metrics in Table 3 (it also ranks top for liver NSD at x2).
- Ablation shows the cycle-consistent loss reduces SNLI from 1.1714 to 0.6050 at x5 when combined with LAM, with the LAM alone giving a small LPIPS gain.
Measured effects reported in the paper
| What was changed | Where | Measured | Effect |
|---|---|---|---|
| add cycle-consistent loss (ablation) | CycleINR · Chest dataset x5 | SNLI: 1.1714 -> 0.6134 | Helped |
| add cycle-consistent loss (ablation) | CycleINR with LAM · Chest dataset x5 | SNLI: 1.1395 -> 0.6050 | Helped |
| add local attention mechanism (ablation) | CycleINR with CCL · Chest dataset x5 | SNLI: 0.6134 -> 0.6050 | Helped |
| add local attention mechanism (ablation) | INR without CCL · Chest dataset x5 | PSNR: 35.1960 -> 35.1395 | Hurt |
| add cycle-consistent loss (ablation) | INR without LAM · Chest dataset x5 | PSNR: 35.1960 -> 34.9610 | Hurt |
| use CycleINR instead of SAINT | Volumetric super-resolution · Chest dataset x2 | PSNR: 44.3977 -> 43.0137 | Hurt |
| use CycleINR instead of SAINT | Volumetric super-resolution · Chest dataset x3 | PSNR: 40.8705 -> 39.2748 | Hurt |
| use CycleINR instead of SAINT | Volumetric super-resolution · Chest dataset x5 | PSNR: 36.9940 -> 35.0022 | Hurt |
| use CycleINR instead of cubic interpolation | Volumetric super-resolution · Chest dataset x2 | SNLI: 0.5318 -> 0.3527 | Helped |
| use CycleINR instead of cubic interpolation | Volumetric super-resolution · Chest dataset x3 | SNLI: 0.5322 -> 0.6674 | Hurt |
| use CycleINR instead of cubic interpolation | Volumetric super-resolution · Chest dataset x5 | SNLI: 0.5336 -> 0.6050 | Hurt |
| use CycleINR instead of Trilinear interpolation | Volumetric super-resolution · MSD liver x2 | DSC liver: 0.9892 -> 0.9911 | Helped |
Surprising findings
- CycleINR has lower PSNR and SSIM than SAINT, TVSRN, and ArSSR at x5 but better perceptual and slice-consistency scores, and the authors argue PSNR/SSIM favor over-smoothed outputs.
Limitations
- Evaluated only on an in-house chest CT dataset and one public liver dataset; generalization to other modalities is untested.
- PSNR and SSIM are lower than several baselines at larger scales, so gains depend on perceptual and proposed SNLI metrics.
- Tumor segmentation results at x2 and x3 are not uniformly best, and interpolation methods win in some settings.
Experimental setup
Datasets: Private chest CT dataset (204 volumes) Medical Segmentation Decathlon Task03 Liver
Benchmarks: Private chest CT dataset MSD Task03 Liver
Metrics: PSNR SSIM LPIPS SNLI DSC NSD
Baselines: Cubic interpolation Trilinear interpolation TVSRN ArSSR SAINT
Builds on: ArSSR LIIF CycleGAN bilateral filtering
Closest papers by meaning
- Better Tokens for Better 3D: Advancing Vision-Language Modeling in 3D Medical Imaging (NeurIPS 2025 · similarity 0.85)
- Introducing 3D Representation for Dense Volume-to-Volume Translation via Score Fusion (ICML 2025 · similarity 0.85)
- LiFT: Lifted Inter-slice Feature Trajectories for 3D Image Generation from 2D Generators (NeurIPS 2026 · similarity 0.84)
- Learning General-purpose Biomedical Volume Representations using Randomized Synthesis (ICLR 2025 · similarity 0.84)
- Raptor: Scalable Train-Free Embeddings for 3D Medical Volumes Leveraging Pretrained 2D Foundation Models (ICML 2025 · similarity 0.84)
- Data-Efficient Unsupervised Interpolation Without Any Intermediate Frame for 4D Medical Images (CVPR 2024 · similarity 0.84)
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