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A Unified Framework for Microscopy Defocus Deblur with Multi-Pyramid Transformer and Contrastive Learning
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Proposes a multi-pyramid transformer (MPT) with cross-scale window attention and an extended frequency contrastive regularization (EFCR) for microscopy defocus deblurring, with a new surgical microscopy blur dataset.
Problem
Defocus blur in microscopy (cell and surgical) degrades images and downstream tasks; microscopy images need longer attention spans than natural images and suffer from scarce blur-sharp training data.
Approach
A U-shaped transformer whose pyramid blocks use cross-scale window attention (local queries vs. downscaled key-values) plus intra-scale channel attention fused by an asymmetric-activation FEFN, combined with a wavelet-domain contrastive loss that uses synthetic reblurring and cross-domain extra data (LFDOF) to exploit latent deblur signals.
Key results
- MPT+EFCRex reaches 35.16 dB PSNR on BBBC006w1 versus 34.79 for Restormer, and 26.27 dB on DPDD vs 25.98 for Restormer.
- On cell detection over BBBC006, MPT+EFCRex improves mean AP by 19.57% over blurry input, versus 16.05% for Restormer and 13.50% for GRL.
- MPT uses 76 FLOPs and 19.80M parameters versus Restormer's 141 FLOPs and 26.12M, with the paper reporting roughly 46% fewer FLOPs.
Measured effects reported in the paper
| What was changed | Where | Measured | Effect |
|---|---|---|---|
| use MPT instead of the strongest listed baseline | microscopy deblurring · BBBC006w1 | PSNR: 34.79 -> 34.89 | Helped |
| use MPT instead of the strongest listed baseline | microscopy deblurring · BBBC006w2 | PSNR: 29.78 -> 29.85 | Helped |
| use MPT instead of the strongest listed baseline | microscopy deblurring · 3DHistech | PSNR: 33.49 -> 33.55 | Helped |
| use MPT instead of the strongest listed baseline | microscopy deblurring · CaDISBlur | PSNR: 44.86 -> 44.98 | Helped |
| add EFCR to MPT (ablation) | MPT · BBBC006w1 | PSNR: 34.89 -> 34.96 | Helped |
| add EFCR to MPT (ablation) | MPT · DPDD | PSNR: 26.21 -> 26.23 | Helped |
| add LFDOF as extra data with EFCRex (ablation) | MPT+EFCR · BBBC006w1 | PSNR: 34.96 -> 35.16 | Helped |
| add LFDOF as extra data with EFCRex (ablation) | MPT+EFCR · DPDD | PSNR: 26.23 -> 26.27 | Helped |
| replace CSWA with window attention (ablation) | MPT · DPDD, BBBC006w1, CaDISBlur | PSNR: 26.21 -> 26.13; 34.89 -> 34.10; 44.98 -> 44.78 | Hurt |
| replace CSWA and ISCA with window attention (ablation) | MPT · DPDD, BBBC006w1, CaDISBlur | PSNR: 26.21 -> 25.92; 34.89 -> 33.98; 44.98 -> 44.02 | Hurt |
| replace the FEFN asymmetric activation with concatenation followed by GELU (ablation) | MPT · DPDD, BBBC006w1, CaDISBlur | PSNR: 26.21 -> 26.18; 34.89 -> 34.86; 44.98 -> 44.84 | Hurt |
| replace the FEFN asymmetric activation with addition followed by GELU (ablation) | MPT · DPDD, BBBC006w1, CaDISBlur | PSNR: 26.21 -> 26.03; 34.89 -> 34.75; 44.98 -> 44.87 | Hurt |
Surprising findings
- Naive pretraining on extra data then fine-tuning gave trivial or negative gains (e.g., -0.02 dB on BBBC006w1), while EFCRex gave larger gains.
Limitations
- Evaluation on larger-scale extra datasets such as ImageNet is left for future work.
- Ablations and dataset details are deferred to supplementary material.
Experimental setup
Datasets: DPDD LFDOF BBBC006 3DHistech CaDISBlur CUHK WNLO CataBlur CaDIS
Benchmarks: DPDD BBBC006 3DHistech CaDISBlur WNLO CataBlur CUHK
Metrics: PSNR SSIM LPIPS AP mIoU PA FLOPs
Baselines: DRBNet GKMNet MIMO-UNet MSSNet SwinIR PANet GRL Restormer KPAC IFAN NRKNet
Builds on: Restormer GRL DRBNet contrastive regularization
Closest papers by meaning
- Residual Diffusion Deblurring Model for Single Image Defocus Deblurring (AAAI 2025 · similarity 0.85)
- ChAda-ViT : Channel Adaptive Attention for Joint Representation Learning of Heterogeneous Microscopy Images (CVPR 2024 · similarity 0.84)
- DeblurDiff: Real-Word Image Deblurring with Generative Diffusion Models (NeurIPS 2025 · similarity 0.83)
- Prior and Prediction Inverse Kernel Transformer for Single Image Defocus Deblurring (AAAI 2024 · similarity 0.83)
- Quad-Pixel Image Defocus Deblurring: A New Benchmark and Model (CVPR 2025 · similarity 0.83)
- Efficient RAW Image Deblurring with Adaptive Frequency Modulation (NeurIPS 2025 · similarity 0.83)
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