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Quantifying Explainers of Graph Neural Networks in Computational Pathology

CVPR 2021 · Graph learning › Graph self-supervised learning · approach: Brain and biological graph learning · 74 citations (OpenAlex)

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Measured effects reported in the paper

What was changedWhereMeasuredEffect
Use GnnExplainer rather than GraphGrad-CAM++GIN cell-graph explanations · BRACSmaximum separability (without risk): 9.09 -> 12.98Helped
Use GnnExplainer rather than GraphGrad-CAM++GIN cell-graph explanations · BRACSaverage separability (without risk): 5.85 -> 6.25Helped
Use GraphGrad-CAM++ rather than GnnExplainerGIN cell-graph explanations · BRACScorrelated separability (without risk): 0.72 -> 1.16Helped
Use GraphGrad-CAM++ rather than GraphGrad-CAMGIN cell-graph explanations · BRACScorrelated separability (without risk): 1.14 -> 1.16Helped
Use GraphGrad-CAM++ rather than GraphGrad-CAMGIN cell-graph explanations · BRACSaverage separability (without risk): 5.80 -> 5.85No clear effect
Use any studied graph explainer rather than random nucleus selectionGIN cell-graph explanations · BRACSaverage separability (without risk): Random: 3.00; GnnExplainer: 6.25; GraphGrad-CAM: 5.80; GraphGrad-CAM++: 5.85; GraphLRP: 4.44Helped
Use GraphLRP rather than GraphGrad-CAM++GIN cell-graph explanations · BRACScorrelated separability (without risk): 1.16 -> -0.87Hurt
Select nuclei by explainer importance rather than randomlyBRACS cell-graph explanations · BRACSaverage separability: Random: 3.00; GnnExplainer: 6.25; GraphGrad-CAM: 5.80; GraphGrad-CAM++: 5.85; GraphLRP: 4.44Helped

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